RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W SOF1P33750 489 aaKnown RBP3.5□□□□□ -1.85
NUP85YJR042W YER121WP40076 114 aa3.5□□□□□ -1.85
NUP85YJR042W RFC4P40339 323 aaKnown RBP3.5□□□□□ -1.85
NUP85YJR042W COA1P40452 197 aa3.5□□□□□ -1.85
NUP85YJR042W PAC11P40960 533 aa3.5□□□□□ -1.85
NUP85YJR042W BNA3P47039 444 aaKnown RBP3.5□□□□□ -1.85
NUP85YJR042W YTP1P53584 459 aa3.5□□□□□ -1.85
NUP85YJR042W NUP53Q03790 475 aa3.5□□□□□ -1.85
NUP85YJR042W BUR2Q05949 395 aa3.5□□□□□ -1.85
NUP85YJR042W YDL057WQ07379 328 aa3.5□□□□□ -1.85
NUP85YJR042W AAD15Q08361 143 aa3.5□□□□□ -1.85
NUP85YJR042W VIK1Q12045 647 aa3.5□□□□□ -1.85
NUP85YJR042W GLE1Q12315 538 aa3.5□□□□□ -1.85
NUP85YJR042W YKL183C-AQ3E765 70 aa3.5□□□□□ -1.85
NUP85YJR042W THP2O13539 261 aaKnown RBP3.49□□□□□ -1.85
NUP85YJR042W RHO2P06781 192 aa3.49□□□□□ -1.85
NUP85YJR042W CLN3P13365 580 aa3.49□□□□□ -1.85
NUP85YJR042W UTR1P21373 530 aa3.49□□□□□ -1.85
NUP85YJR042W CDC10P25342 322 aaKnown RBP3.49□□□□□ -1.85
NUP85YJR042W MSK1P32048 576 aa3.49□□□□□ -1.85
NUP85YJR042W ICS2P38284 255 aa3.49□□□□□ -1.85
NUP85YJR042W VBA2P38358 474 aaKnown RBP3.49□□□□□ -1.85
NUP85YJR042W YGR210CP42942 411 aa3.49□□□□□ -1.85
NUP85YJR042W TRS85P46944 698 aa3.49□□□□□ -1.85
NUP85YJR042W RIM8P53179 542 aa3.49□□□□□ -1.85
NUP85YJR042W NSG2P53898 299 aa3.49□□□□□ -1.85
NUP85YJR042W ARP10Q04549 284 aa3.49□□□□□ -1.85
NUP85YJR042W YPL225WQ08971 146 aaKnown RBP3.49□□□□□ -1.85
NUP85YJR042W YDL177CQ12257 170 aa3.49□□□□□ -1.85
NUP85YJR042W REV1P12689 985 aa3.48□□□□□ -1.85
NUP85YJR042W MXR2P25566 168 aa3.48□□□□□ -1.85
NUP85YJR042W FUB1P25659 250 aa3.48□□□□□ -1.85
NUP85YJR042W ATP7P30902 174 aa3.48□□□□□ -1.85
NUP85YJR042W RSM22P36056 628 aa3.48□□□□□ -1.85
NUP85YJR042W YJL163CP46996 555 aa3.48□□□□□ -1.85
NUP85YJR042W RPC17P47076 161 aa3.48□□□□□ -1.85
NUP85YJR042W YJR011CP47086 261 aaPredicted RBP3.48□□□□□ -1.85
NUP85YJR042W LYS20P48570 428 aaKnown RBP3.48□□□□□ -1.85
NUP85YJR042W BUD32P53323 261 aa3.48□□□□□ -1.85
NUP85YJR042W DIP5P53388 608 aa3.48□□□□□ -1.85
NUP85YJR042W MRP51Q02950 344 aa3.48□□□□□ -1.85
NUP85YJR042W YMR187CQ03236 431 aa3.48□□□□□ -1.85
NUP85YJR042W ROT1Q03691 256 aa3.48□□□□□ -1.85
NUP85YJR042W YMR114CQ04471 368 aaKnown RBP3.48□□□□□ -1.85
NUP85YJR042W NAT4Q04751 285 aa3.48□□□□□ -1.85
NUP85YJR042W ECI1Q05871 280 aa3.48□□□□□ -1.85
NUP85YJR042W COQ11Q05892 277 aa3.48□□□□□ -1.85
NUP85YJR042W SNA4Q07549 140 aa3.48□□□□□ -1.85
NUP85YJR042W FSH3Q99369 266 aa3.48□□□□□ -1.85
NUP85YJR042W YDR157WA0A023PZE8 133 aa3.48□□□□□ -1.85
NUP85YJR042W SUC2P00724 532 aa3.48□□□□□ -1.85
NUP85YJR042W TRP3P00937 484 aa3.48□□□□□ -1.85
NUP85YJR042W NHP6BP11633 99 aaKnown RBP3.48□□□□□ -1.85
NUP85YJR042W PPA2P28239 310 aa3.48□□□□□ -1.85
NUP85YJR042W YKL071WP36086 256 aa3.48□□□□□ -1.85
NUP85YJR042W MIC12P38341 106 aa3.48□□□□□ -1.85
NUP85YJR042W YMR134WP40207 237 aa3.48□□□□□ -1.85
NUP85YJR042W SCD6P45978 349 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
NUP85YJR042W YPL068CQ02749 293 aa3.48□□□□□ -1.85
NUP85YJR042W CAC2Q04199 468 aa3.48□□□□□ -1.85
NUP85YJR042W RAD34Q06665 692 aa3.48□□□□□ -1.85
NUP85YJR042W IRC13Q08630 104 aa3.48□□□□□ -1.85
NUP85YJR042W YER145C-AA0A023PYF4 145 aa3.47□□□□□ -1.85
NUP85YJR042W QCR7P00128 127 aa3.47□□□□□ -1.85
NUP85YJR042W RAD7P06779 565 aa3.47□□□□□ -1.85
NUP85YJR042W CSM1P25651 190 aa3.47□□□□□ -1.85
NUP85YJR042W RCK2P38623 610 aa3.47□□□□□ -1.85
NUP85YJR042W GAA1P39012 614 aa3.47□□□□□ -1.85
NUP85YJR042W UTP25P40498 721 aaKnown RBP3.47□□□□□ -1.85
NUP85YJR042W PTR3P43606 678 aa3.47□□□□□ -1.85
NUP85YJR042W MUP1P50276 574 aa3.47□□□□□ -1.85
NUP85YJR042W ATG26Q06321 1198 aa3.47□□□□□ -1.85
NUP85YJR042W ACK1Q07622 623 aaPredicted RBP3.47□□□□□ -1.85
NUP85YJR042W RKI1Q12189 258 aa3.47□□□□□ -1.85
NUP85YJR042W RKM5Q12367 367 aa3.47□□□□□ -1.85
NUP85YJR042W SEY1Q99287 776 aa3.47□□□□□ -1.85
NUP85YJR042W CBF1P17106 351 aa3.47□□□□□ -1.85
NUP85YJR042W FAR1P21268 830 aa3.47□□□□□ -1.85
NUP85YJR042W RPS2P25443 254 aaKnown RBP3.47□□□□□ -1.85
NUP85YJR042W MEI4P29467 408 aa3.47□□□□□ -1.85
NUP85YJR042W ECM25P32525 599 aa3.47□□□□□ -1.85
NUP85YJR042W LHS1P36016 881 aa3.47□□□□□ -1.85
NUP85YJR042W CHK1P38147 527 aa3.47□□□□□ -1.85
NUP85YJR042W ATG7P38862 630 aa3.47□□□□□ -1.85
NUP85YJR042W UBP5P39944 805 aa3.47□□□□□ -1.85
NUP85YJR042W YER184CP39961 794 aa3.47□□□□□ -1.85
NUP85YJR042W HOC1P47124 396 aa3.47□□□□□ -1.85
NUP85YJR042W TIS11P47977 285 aa3.47□□□□□ -1.85
NUP85YJR042W NAS6P50086 228 aa3.47□□□□□ -1.85
NUP85YJR042W NMA2P53204 395 aa3.47□□□□□ -1.85
NUP85YJR042W YIP3P53633 176 aa3.47□□□□□ -1.85
NUP85YJR042W SMP3Q04174 516 aa3.47□□□□□ -1.85
NUP85YJR042W ASR1Q06834 288 aa3.47□□□□□ -1.85
NUP85YJR042W THP1Q08231 455 aa3.47□□□□□ -1.85
NUP85YJR042W RUP1Q12242 671 aa3.47□□□□□ -1.85
NUP85YJR042W SUT2Q12286 268 aa3.47□□□□□ -1.85
NUP85YJR042W YMR085WP0CF18 432 aa3.46□□□□□ -1.86
NUP85YJR042W YAK1P14680 807 aa3.46□□□□□ -1.86
NUP85YJR042W CLB2P24869 491 aa3.46□□□□□ -1.86
NUP85YJR042W MRPS5P33759 307 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms