RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W YBR013CP38215 129 aa7.61□□□□□ -1.19
UFD1YGR048W RRP3P38712 501 aaKnown RBP7.61□□□□□ -1.19
UFD1YGR048W RGI1P40043 161 aaPredicted RBP7.61□□□□□ -1.19
UFD1YGR048W YFL052WP43551 465 aa7.61□□□□□ -1.19
UFD1YGR048W YGL159WP53110 370 aa7.61□□□□□ -1.19
UFD1YGR048W PRM8P53174 237 aa7.61□□□□□ -1.19
UFD1YGR048W GTR2P53290 341 aa7.61□□□□□ -1.19
UFD1YGR048W PRM1P53835 661 aa7.61□□□□□ -1.19
UFD1YGR048W KIN4Q01919 800 aa7.61□□□□□ -1.19
UFD1YGR048W OST6Q03723 332 aa7.61□□□□□ -1.19
UFD1YGR048W HPT1Q04178 221 aaKnown RBP7.61□□□□□ -1.19
UFD1YGR048W DUS4Q06063 367 aa7.61□□□□□ -1.19
UFD1YGR048W BOP2Q06150 570 aa7.61□□□□□ -1.19
UFD1YGR048W RIF2Q06208 395 aa7.61□□□□□ -1.19
UFD1YGR048W TPO3Q06451 622 aa7.61□□□□□ -1.19
UFD1YGR048W YDL199CQ12407 687 aa7.61□□□□□ -1.19
UFD1YGR048W HTB1P02293 131 aaKnown RBP7.6□□□□□ -1.19
UFD1YGR048W HTB2P02294 131 aa7.6□□□□□ -1.19
UFD1YGR048W YCK2P23292 546 aaKnown RBP7.6□□□□□ -1.19
UFD1YGR048W STE14P32584 239 aa7.6□□□□□ -1.19
UFD1YGR048W SFC1P33303 322 aa7.6□□□□□ -1.19
UFD1YGR048W AIM29P36154 155 aa7.6□□□□□ -1.19
UFD1YGR048W ATG8P38182 117 aaRIP-Chip data7.6□□□□□ -1.19not detected
UFD1YGR048W AFG3P39925 761 aa7.6□□□□□ -1.19
UFD1YGR048W DOT6P40059 670 aaKnown RBP7.6□□□□□ -1.19
UFD1YGR048W PRE6P40303 254 aaKnown RBP7.6□□□□□ -1.19
UFD1YGR048W COA1P40452 197 aa7.6□□□□□ -1.19
UFD1YGR048W CFD1P40558 293 aa7.6□□□□□ -1.19
UFD1YGR048W MTO1P53070 669 aa7.6□□□□□ -1.19
UFD1YGR048W ERO1Q03103 563 aa7.6□□□□□ -1.19
UFD1YGR048W SNO1Q03144 224 aa7.6□□□□□ -1.19
UFD1YGR048W YML083CQ04526 418 aa7.6□□□□□ -1.19
UFD1YGR048W THP1Q08231 455 aa7.6□□□□□ -1.19
UFD1YGR048W YPL245WQ12179 454 aaKnown RBP7.6□□□□□ -1.19
UFD1YGR048W HOS1Q12214 470 aa7.6□□□□□ -1.19
UFD1YGR048W YPR145C-AQ2V2P0 78 aa7.6□□□□□ -1.19
UFD1YGR048W YKL018C-AQ3E7A7 99 aa7.6□□□□□ -1.19
UFD1YGR048W YLR422WQ06409 1932 aa7.6□□□□□ -1.19
UFD1YGR048W SLH1P53327 1967 aaKnown RBP7.59□□□□□ -1.19
UFD1YGR048W NAM2P11325 894 aa7.59□□□□□ -1.19
UFD1YGR048W MIR1P23641 311 aaKnown RBP7.59□□□□□ -1.19
UFD1YGR048W YCR061WP25639 631 aa7.59□□□□□ -1.19
UFD1YGR048W HOM6P31116 359 aaKnown RBP7.59□□□□□ -1.19
UFD1YGR048W DAL3P32459 195 aa7.59□□□□□ -1.19
UFD1YGR048W POL12P38121 705 aaPredicted RBP7.59□□□□□ -1.19
UFD1YGR048W MUP3P38734 546 aa7.59□□□□□ -1.19
UFD1YGR048W YEL025CP39991 1188 aa7.59□□□□□ -1.19
UFD1YGR048W ICP55P40051 511 aa7.59□□□□□ -1.19
UFD1YGR048W RPL10P41805 221 aaKnown RBP7.59□□□□□ -1.19
UFD1YGR048W BIT61P47041 543 aa7.59□□□□□ -1.19
UFD1YGR048W TAD2P47058 250 aa7.59□□□□□ -1.19
UFD1YGR048W JHD2P47156 728 aaPredicted RBP7.59□□□□□ -1.19
UFD1YGR048W YJR154WP47181 346 aa7.59□□□□□ -1.19
UFD1YGR048W ALT2P52892 507 aa7.59□□□□□ -1.19
UFD1YGR048W STR3P53101 465 aaKnown RBP7.59□□□□□ -1.19
UFD1YGR048W YDR124WQ04608 324 aa7.59□□□□□ -1.19
UFD1YGR048W SPR28Q04921 423 aa7.59□□□□□ -1.19
UFD1YGR048W YHC1Q05900 231 aaKnown RBP7.59□□□□□ -1.19
UFD1YGR048W YLR173WQ06247 608 aa7.59□□□□□ -1.19
UFD1YGR048W ANT1Q06497 328 aa7.59□□□□□ -1.19
UFD1YGR048W THI72Q08579 599 aa7.59□□□□□ -1.19
UFD1YGR048W REC8Q12188 680 aa7.59□□□□□ -1.19
UFD1YGR048W ERG27Q12452 347 aaKnown RBP7.59□□□□□ -1.19
UFD1YGR048W YPL247CQ12523 523 aa7.59□□□□□ -1.19
UFD1YGR048W HKR1P41809 1802 aa7.58□□□□□ -1.2
UFD1YGR048W RPS4AP0CX35 261 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W RPS4BP0CX36 261 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W HOM3P10869 527 aa7.58□□□□□ -1.2
UFD1YGR048W PUT4P15380 627 aa7.58□□□□□ -1.2
UFD1YGR048W ERD1P16151 362 aa7.58□□□□□ -1.2
UFD1YGR048W FUN14P18411 198 aa7.58□□□□□ -1.2
UFD1YGR048W RNA14P25298 677 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W GRX1P25373 110 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W BIT2P38346 545 aa7.58□□□□□ -1.2
UFD1YGR048W GIM4P40005 111 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W PAN6P40459 309 aa7.58□□□□□ -1.2
UFD1YGR048W RPA34P47006 233 aaPredicted RBP7.58□□□□□ -1.2
UFD1YGR048W PUS4P48567 403 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W MNN10P50108 393 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W PHO23P50947 330 aa7.58□□□□□ -1.2
UFD1YGR048W LSB1P53281 241 aa7.58□□□□□ -1.2
UFD1YGR048W NSG2P53898 299 aa7.58□□□□□ -1.2
UFD1YGR048W KTR6P54070 446 aa7.58□□□□□ -1.2
UFD1YGR048W ARG5,6Q01217 863 aa7.58□□□□□ -1.2
UFD1YGR048W GAD1Q04792 585 aa7.58□□□□□ -1.2
UFD1YGR048W SSK1Q07084 712 aa7.58□□□□□ -1.2
UFD1YGR048W MFG1Q07684 458 aa7.58□□□□□ -1.2
UFD1YGR048W MED7Q08278 222 aa7.58□□□□□ -1.2
UFD1YGR048W SIA1Q12212 622 aa7.58□□□□□ -1.2
UFD1YGR048W FYV7Q12247 151 aa7.58□□□□□ -1.2
UFD1YGR048W YPR014CQ6B0W2 109 aa7.58□□□□□ -1.2
UFD1YGR048W HRP1Q99383 534 aaKnown RBP7.58□□□□□ -1.2
UFD1YGR048W RPS9AO13516 197 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W RPL31AP0C2H8 113 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W RPL31BP0C2H9 113 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W SAM35P14693 329 aa7.57□□□□□ -1.2
UFD1YGR048W HSP26P15992 214 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
UFD1YGR048W COX11P19516 300 aaKnown RBP7.57□□□□□ -1.2
UFD1YGR048W STE50P25344 346 aa7.57□□□□□ -1.2
UFD1YGR048W RSA4P25382 515 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms