RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C TRX1P22217 103 aaKnown RBP2.65□□□□□ -1.99
VAB2YEL005C GIT1P25346 518 aa2.65□□□□□ -1.99
VAB2YEL005C POT1P27796 417 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
VAB2YEL005C LDS1P31379 325 aa2.65□□□□□ -1.99
VAB2YEL005C ANR2P36090 516 aaPredicted RBP2.65□□□□□ -1.99
VAB2YEL005C GPI18P38211 433 aa2.65□□□□□ -1.99
VAB2YEL005C BMT2P38278 337 aa2.65□□□□□ -1.99
VAB2YEL005C OM14P38325 134 aa2.65□□□□□ -1.99
VAB2YEL005C TIM17P39515 158 aa2.65□□□□□ -1.99
VAB2YEL005C YNL320WP42840 284 aa2.65□□□□□ -1.99
VAB2YEL005C HST1P53685 503 aa2.65□□□□□ -1.99
VAB2YEL005C YNL146WP53906 100 aa2.65□□□□□ -1.99
VAB2YEL005C UTP6Q02354 440 aaKnown RBP2.65□□□□□ -1.99
VAB2YEL005C FSH2Q05015 223 aa2.65□□□□□ -1.99
VAB2YEL005C GAT3Q07928 141 aa2.65□□□□□ -1.99
VAB2YEL005C RGS2Q99188 309 aa2.65□□□□□ -1.99
VAB2YEL005C COX4P04037 155 aa2.64□□□□□ -1.99
VAB2YEL005C ASP3-2P0CX77 362 aa2.64□□□□□ -1.99
VAB2YEL005C ASP3-3P0CX78 362 aa2.64□□□□□ -1.99
VAB2YEL005C ASP3-4P0CX79 362 aa2.64□□□□□ -1.99
VAB2YEL005C ASP3-1P0CZ17 362 aa2.64□□□□□ -1.99
VAB2YEL005C CMK2P22517 447 aa2.64□□□□□ -1.99
VAB2YEL005C YEL043WP32618 956 aa2.64□□□□□ -1.99
VAB2YEL005C PRS1P32895 427 aaKnown RBP2.64□□□□□ -1.99
VAB2YEL005C VAM7P32912 316 aa2.64□□□□□ -1.99
VAB2YEL005C YKR015CP36111 568 aa2.64□□□□□ -1.99
VAB2YEL005C YPT35P38815 214 aaKnown RBP2.64□□□□□ -1.99
VAB2YEL005C LCP5P40079 357 aaPredicted RBP2.64□□□□□ -1.99
VAB2YEL005C IGD1P43598 195 aa2.64□□□□□ -1.99
VAB2YEL005C ABM1P47146 123 aa2.64□□□□□ -1.99
VAB2YEL005C PDR16P53860 351 aaKnown RBP2.64□□□□□ -1.99
VAB2YEL005C YDR286CQ05530 114 aa2.64□□□□□ -1.99
VAB2YEL005C GAS2Q06135 555 aa2.64□□□□□ -1.99
VAB2YEL005C PML1Q07930 204 aaPredicted RBP2.64□□□□□ -1.99
VAB2YEL005C HIF1Q12373 385 aa2.64□□□□□ -1.99
VAB2YEL005C APC2Q12440 853 aa2.64□□□□□ -1.99
VAB2YEL005C UBA3Q99344 299 aa2.64□□□□□ -1.99
VAB2YEL005C STF1P01098 86 aa2.63□□□□□ -1.99
VAB2YEL005C PRB1P09232 635 aa2.63□□□□□ -1.99
VAB2YEL005C HSP26P15992 214 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
VAB2YEL005C VMA2P16140 517 aaKnown RBP2.63□□□□□ -1.99
VAB2YEL005C ARF2P19146 181 aaKnown RBP2.63□□□□□ -1.99
VAB2YEL005C UIP5P36137 443 aa2.63□□□□□ -1.99
VAB2YEL005C KEG1P43614 200 aa2.63□□□□□ -1.99
VAB2YEL005C LST7P53237 242 aa2.63□□□□□ -1.99
VAB2YEL005C ENT5Q03769 411 aaKnown RBP2.63□□□□□ -1.99
VAB2YEL005C YPR078CQ06813 372 aa2.63□□□□□ -1.99
VAB2YEL005C DNL4Q08387 944 aaPredicted RBP2.63□□□□□ -1.99
VAB2YEL005C LDB17Q12342 491 aa2.63□□□□□ -1.99
VAB2YEL005C RPL23AP0CX41 137 aaKnown RBP2.62□□□□□ -1.99
VAB2YEL005C RPL23BP0CX42 137 aaKnown RBP2.62□□□□□ -1.99
VAB2YEL005C CKI1P20485 582 aa2.62□□□□□ -1.99
VAB2YEL005C HXT2P23585 541 aa2.62□□□□□ -1.99
VAB2YEL005C ANP1P32629 500 aa2.62□□□□□ -1.99
VAB2YEL005C YBR241CP38142 488 aa2.62□□□□□ -1.99
VAB2YEL005C ALP1P38971 573 aa2.62□□□□□ -1.99
VAB2YEL005C PEX22P39718 180 aa2.62□□□□□ -1.99
VAB2YEL005C CIN2P46670 268 aa2.62□□□□□ -1.99
VAB2YEL005C YHC3P47040 408 aa2.62□□□□□ -1.99
VAB2YEL005C YGL114WP53134 725 aa2.62□□□□□ -1.99
VAB2YEL005C PRP38Q00723 242 aaPredicted RBP2.62□□□□□ -1.99
VAB2YEL005C NAT4Q04751 285 aa2.62□□□□□ -1.99
VAB2YEL005C YHC1Q05900 231 aaKnown RBP2.62□□□□□ -1.99
VAB2YEL005C PGC1Q08959 321 aa2.62□□□□□ -1.99
VAB2YEL005C SFM1Q12314 213 aa2.62□□□□□ -1.99
VAB2YEL005C PSY3Q12318 242 aa2.62□□□□□ -1.99
VAB2YEL005C YOR012WQ12351 137 aa2.62□□□□□ -1.99
VAB2YEL005C SFG1Q12507 346 aa2.62□□□□□ -1.99
VAB2YEL005C DET1Q99288 334 aaKnown RBP2.62□□□□□ -1.99
VAB2YEL005C SAG1P20840 650 aa2.61□□□□□ -1.99
VAB2YEL005C GRR1P24814 1151 aa2.61□□□□□ -1.99
VAB2YEL005C MID2P36027 376 aa2.61□□□□□ -1.99
VAB2YEL005C PCH2P38126 564 aa2.61□□□□□ -1.99
VAB2YEL005C PRP39P39682 629 aaKnown RBP2.61□□□□□ -1.99
VAB2YEL005C EFM3P47163 339 aa2.61□□□□□ -1.99
VAB2YEL005C YGL262WP53054 175 aa2.61□□□□□ -1.99
VAB2YEL005C YPS5P53057 165 aa2.61□□□□□ -1.99
VAB2YEL005C RNH201P53942 307 aa2.61□□□□□ -1.99
VAB2YEL005C SLT2Q00772 484 aa2.61□□□□□ -1.99
VAB2YEL005C MRPS16Q02608 121 aa2.61□□□□□ -1.99
VAB2YEL005C VHS1Q03785 461 aa2.61□□□□□ -1.99
VAB2YEL005C SPH1Q06160 661 aa2.61□□□□□ -1.99
VAB2YEL005C AIM45Q12480 344 aaKnown RBP2.61□□□□□ -1.99
VAB2YEL005C MIR1P23641 311 aaKnown RBP2.6□□□□□ -1.99
VAB2YEL005C CHA1P25379 360 aaKnown RBP2.6□□□□□ -1.99
VAB2YEL005C MXR2P25566 168 aa2.6□□□□□ -1.99
VAB2YEL005C POP2P39008 433 aa2.6□□□□□ -1.99
VAB2YEL005C CTK3P46963 296 aaPredicted RBP2.6□□□□□ -1.99
VAB2YEL005C AIM23P47015 356 aa2.6□□□□□ -1.99
VAB2YEL005C YDR115WQ04598 105 aa2.6□□□□□ -1.99
VAB2YEL005C BUR2Q05949 395 aa2.6□□□□□ -1.99
VAB2YEL005C YLR177WQ06251 628 aa2.6□□□□□ -1.99
VAB2YEL005C ATP16Q12165 160 aa2.6□□□□□ -1.99
VAB2YEL005C RPL21BQ12672 160 aaKnown RBP2.6□□□□□ -1.99
VAB2YEL005C SPO24Q3E752 67 aa2.6□□□□□ -1.99
VAB2YEL005C RNR2P09938 399 aaKnown RBP2.59□□□□□ -1.99
VAB2YEL005C CIN8P27895 1000 aa2.59□□□□□ -1.99
VAB2YEL005C MRPS5P33759 307 aa2.59□□□□□ -1.99
VAB2YEL005C MYO3P36006 1272 aa2.59□□□□□ -1.99
VAB2YEL005C YKL071WP36086 256 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms