RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	RRB1	Q04225	511 aa	Known RBP	3.79	□□□□□ -1.8
NSE3	YDR288W	PSY3	Q12318	242 aa		3.79	□□□□□ -1.8
NSE3	YDR288W	HEM4	P06174	275 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	NOP1	P15646	327 aa	Known RBP	3.78	□□□□□ -1.8
NSE3	YDR288W	CKI1	P20485	582 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	GIT1	P25346	518 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	WSC4	P38739	605 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	TIM17	P39515	158 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	RBG1	P39729	369 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	MSC3	Q05812	728 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	APC5	Q08683	685 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	YDL109C	Q12103	647 aa		3.78	□□□□□ -1.8
NSE3	YDR288W	STE7	P06784	515 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	YLL053C	P0CD98	152 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	ZRC1	P20107	442 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	HXT2	P23585	541 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	DEP1	P31385	405 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	CIN2	P46670	268 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	EFM3	P47163	339 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	YNL146W	P53906	100 aa		3.77	□□□□□ -1.81
NSE3	YDR288W	YHC1	Q05900	231 aa	Known RBP	3.77	□□□□□ -1.81
NSE3	YDR288W	AIM45	Q12480	344 aa	Known RBP	3.77	□□□□□ -1.81
NSE3	YDR288W	DET1	Q99288	334 aa	Known RBP	3.77	□□□□□ -1.81
NSE3	YDR288W	VMA2	P16140	517 aa	Known RBP	3.76	□□□□□ -1.81
NSE3	YDR288W	GRR1	P24814	1151 aa		3.76	□□□□□ -1.81
NSE3	YDR288W	SOL2	P37262	315 aa		3.76	□□□□□ -1.81
NSE3	YDR288W	GPI18	P38211	433 aa		3.76	□□□□□ -1.81
NSE3	YDR288W	YPT35	P38815	214 aa	Known RBP	3.76	□□□□□ -1.81
NSE3	YDR288W	IGD1	P43598	195 aa		3.76	□□□□□ -1.81
NSE3	YDR288W	FYV8	P46949	817 aa	Known RBP	3.76	□□□□□ -1.81
NSE3	YDR288W	CTK3	P46963	296 aa	Predicted RBP	3.76	□□□□□ -1.81
NSE3	YDR288W	YHC3	P47040	408 aa		3.76	□□□□□ -1.81
NSE3	YDR288W	LST7	P53237	242 aa		3.76	□□□□□ -1.81
NSE3	YDR288W	FSH2	Q05015	223 aa		3.76	□□□□□ -1.81
NSE3	YDR288W	STF1	P01098	86 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	PRB1	P09232	635 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	RPL23A	P0CX41	137 aa	Known RBP	3.75	□□□□□ -1.81
NSE3	YDR288W	RPL23B	P0CX42	137 aa	Known RBP	3.75	□□□□□ -1.81
NSE3	YDR288W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
NSE3	YDR288W	ARF2	P19146	181 aa	Known RBP	3.75	□□□□□ -1.81
NSE3	YDR288W	LDS1	P31379	325 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	COS9	P36034	407 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	YKR015C	P36111	568 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	ALP1	P38971	573 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	YGL114W	P53134	725 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	MKC7	P53379	596 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	GAS2	Q06135	555 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	FOL3	Q12676	427 aa	Predicted RBP	3.75	□□□□□ -1.81
NSE3	YDR288W	UBA3	Q99344	299 aa		3.75	□□□□□ -1.81
NSE3	YDR288W	COX4	P04037	155 aa		3.74	□□□□□ -1.81
NSE3	YDR288W	RPS16A	P0CX51	143 aa	Known RBP	3.74	□□□□□ -1.81
NSE3	YDR288W	RPS16B	P0CX52	143 aa	Known RBP	3.74	□□□□□ -1.81
NSE3	YDR288W	TPM1	P17536	199 aa	Known RBP	3.74	□□□□□ -1.81
NSE3	YDR288W	CMK2	P22517	447 aa		3.74	□□□□□ -1.81
NSE3	YDR288W	CHA1	P25379	360 aa	Known RBP	3.74	□□□□□ -1.81
NSE3	YDR288W	PRP39	P39682	629 aa	Known RBP	3.74	□□□□□ -1.81
NSE3	YDR288W	KEG1	P43614	200 aa		3.74	□□□□□ -1.81
NSE3	YDR288W	KTR6	P54070	446 aa		3.74	□□□□□ -1.81
NSE3	YDR288W	ENT5	Q03769	411 aa	Known RBP	3.74	□□□□□ -1.81
NSE3	YDR288W	NAT4	Q04751	285 aa		3.74	□□□□□ -1.81
NSE3	YDR288W	SPH1	Q06160	661 aa		3.74	□□□□□ -1.81
NSE3	YDR288W	RGS2	Q99188	309 aa		3.74	□□□□□ -1.81
NSE3	YDR288W	MXR2	P25566	168 aa		3.73	□□□□□ -1.81
NSE3	YDR288W	MRPS5	P33759	307 aa		3.73	□□□□□ -1.81
NSE3	YDR288W	POP2	P39008	433 aa		3.73	□□□□□ -1.81
NSE3	YDR288W	PRP38	Q00723	242 aa	Predicted RBP	3.73	□□□□□ -1.81
NSE3	YDR288W	SFM1	Q12314	213 aa		3.73	□□□□□ -1.81
NSE3	YDR288W	PSK1	P31374	1356 aa		3.73	□□□□□ -1.81
NSE3	YDR288W	FAR1	P21268	830 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	KRR1	P25586	316 aa	Predicted RBP	3.72	□□□□□ -1.81
NSE3	YDR288W	ZUO1	P32527	433 aa	Known RBP	3.72	□□□□□ -1.81
NSE3	YDR288W	PRS1	P32895	427 aa	Known RBP	3.72	□□□□□ -1.81
NSE3	YDR288W	BMT2	P38278	337 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	YHR122W	P38829	231 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	ATG7	P38862	630 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	NAS2	P40555	220 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	YNL320W	P42840	284 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	MRPS16	Q02608	121 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	YDR115W	Q04598	105 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	YLR177W	Q06251	628 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	MCH1	Q07376	486 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	HIF1	Q12373	385 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	APC2	Q12440	853 aa		3.72	□□□□□ -1.81
NSE3	YDR288W	CIN8	P27895	1000 aa		3.71	□□□□□ -1.82
NSE3	YDR288W	YBR241C	P38142	488 aa		3.71	□□□□□ -1.82
NSE3	YDR288W	PEX22	P39718	180 aa		3.71	□□□□□ -1.82
NSE3	YDR288W	SHE4	P51534	789 aa		3.71	□□□□□ -1.82
NSE3	YDR288W	SLT2	Q00772	484 aa		3.71	□□□□□ -1.82
NSE3	YDR288W	DNL4	Q08387	944 aa	Predicted RBP	3.71	□□□□□ -1.82
NSE3	YDR288W	ATP16	Q12165	160 aa		3.71	□□□□□ -1.82
NSE3	YDR288W	SPO24	Q3E752	67 aa		3.71	□□□□□ -1.82
NSE3	YDR288W	ASP3-2	P0CX77	362 aa		3.7	□□□□□ -1.82
NSE3	YDR288W	ASP3-3	P0CX78	362 aa		3.7	□□□□□ -1.82
NSE3	YDR288W	ASP3-4	P0CX79	362 aa		3.7	□□□□□ -1.82
NSE3	YDR288W	ASP3-1	P0CZ17	362 aa		3.7	□□□□□ -1.82
NSE3	YDR288W	MIR1	P23641	311 aa	Known RBP	3.7	□□□□□ -1.82
NSE3	YDR288W	MKK1	P32490	508 aa		3.7	□□□□□ -1.82
NSE3	YDR288W	IST2	P38250	946 aa		3.7	□□□□□ -1.82
NSE3	YDR288W	IML3	P38265	245 aa		3.7	□□□□□ -1.82
NSE3	YDR288W	YMR134W	P40207	237 aa		3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms