RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W WIP1Q2V2P8 89 aa3.97□□□□□ -1.77
TRS85YDR108W ADH2P00331 348 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W AI3P03877 415 aa3.96□□□□□ -1.77
TRS85YDR108W RPL9AP05738 191 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W SPS2P08459 502 aa3.96□□□□□ -1.77
TRS85YDR108W SEC12P11655 471 aa3.96□□□□□ -1.77
TRS85YDR108W PDX1P16451 410 aa3.96□□□□□ -1.77
TRS85YDR108W ACO1P19414 778 aaKnown RBP RIP-Chip data3.96□□□□□ -1.77not detected
TRS85YDR108W YCK2P23292 546 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W GRR1P24814 1151 aa3.96□□□□□ -1.77
TRS85YDR108W ERG6P25087 383 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W YCL002CP25565 263 aa3.96□□□□□ -1.77
TRS85YDR108W GID7P25569 745 aa3.96□□□□□ -1.77
TRS85YDR108W AEP1P32493 518 aa3.96□□□□□ -1.77
TRS85YDR108W LIP5P32875 414 aa3.96□□□□□ -1.77
TRS85YDR108W WBP1P33767 430 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W YKR051WP36142 418 aa3.96□□□□□ -1.77
TRS85YDR108W TFA2P36145 328 aa3.96□□□□□ -1.77
TRS85YDR108W SHE3P38272 425 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W MBA1P38300 278 aa3.96□□□□□ -1.77
TRS85YDR108W SPL2P38839 148 aa3.96□□□□□ -1.77
TRS85YDR108W AIM22P47051 409 aa3.96□□□□□ -1.77
TRS85YDR108W RPL9BP51401 191 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W YGR017WP53210 297 aa3.96□□□□□ -1.77
TRS85YDR108W YGR168CP53293 376 aa3.96□□□□□ -1.77
TRS85YDR108W BUD32P53323 261 aa3.96□□□□□ -1.77
TRS85YDR108W GPD1Q00055 391 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W RHO3Q00245 231 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W MRP51Q02950 344 aa3.96□□□□□ -1.77
TRS85YDR108W MSC1Q03104 513 aa3.96□□□□□ -1.77
TRS85YDR108W CDC123Q05791 360 aa3.96□□□□□ -1.77
TRS85YDR108W YLR179CQ06252 201 aaKnown RBP3.96□□□□□ -1.77
TRS85YDR108W FRQ1Q06389 190 aa3.96□□□□□ -1.77
TRS85YDR108W MFG1Q07684 458 aa3.96□□□□□ -1.77
TRS85YDR108W YOL159CQ08300 171 aa3.96□□□□□ -1.77
TRS85YDR108W HOS1Q12214 470 aa3.96□□□□□ -1.77
TRS85YDR108W YOL159C-AQ3E769 90 aa3.96□□□□□ -1.77
TRS85YDR108W MTR10Q99189 972 aa3.96□□□□□ -1.77
TRS85YDR108W TY4B-HP0C2J7 1802 aa3.96□□□□□ -1.78
TRS85YDR108W TY4B-JP47024 1803 aa3.96□□□□□ -1.78
TRS85YDR108W CYC1P00044 109 aaPredicted RBP3.96□□□□□ -1.78
TRS85YDR108W RPL31AP0C2H8 113 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W RPL31BP0C2H9 113 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W REV1P12689 985 aa3.96□□□□□ -1.78
TRS85YDR108W MAG1P22134 296 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W NPR1P22211 790 aa3.96□□□□□ -1.78
TRS85YDR108W SNC1P31109 117 aa3.96□□□□□ -1.78
TRS85YDR108W SFP1P32432 683 aa3.96□□□□□ -1.78
TRS85YDR108W APE3P37302 537 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W AIM3P38266 947 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W GLR1P41921 483 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W TAX4P47030 604 aa3.96□□□□□ -1.78
TRS85YDR108W HXT16P47185 567 aa3.96□□□□□ -1.78
TRS85YDR108W YGL204CP53089 101 aa3.96□□□□□ -1.78
TRS85YDR108W GPG1P53130 126 aa3.96□□□□□ -1.78
TRS85YDR108W RPN14P53196 417 aa3.96□□□□□ -1.78
TRS85YDR108W NQM1P53228 333 aaPredicted RBP3.96□□□□□ -1.78
TRS85YDR108W GND2P53319 492 aa3.96□□□□□ -1.78
TRS85YDR108W BRE5P53741 515 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W SAE3P89114 91 aa3.96□□□□□ -1.78
TRS85YDR108W RPA49Q01080 415 aaPredicted RBP3.96□□□□□ -1.78
TRS85YDR108W ODC1Q03028 310 aa3.96□□□□□ -1.78
TRS85YDR108W YDR248CQ03786 193 aa3.96□□□□□ -1.78
TRS85YDR108W RKM2Q03942 479 aa3.96□□□□□ -1.78
TRS85YDR108W TRM12Q04235 462 aa3.96□□□□□ -1.78
TRS85YDR108W PRM6Q04705 352 aa3.96□□□□□ -1.78
TRS85YDR108W TVP18Q04767 167 aa3.96□□□□□ -1.78
TRS85YDR108W MRI1Q06489 411 aaKnown RBP3.96□□□□□ -1.78
TRS85YDR108W OPI10Q08202 246 aa3.96□□□□□ -1.78
TRS85YDR108W CSM4Q08955 156 aa3.96□□□□□ -1.78
TRS85YDR108W YPL257WQ08974 193 aa3.96□□□□□ -1.78
TRS85YDR108W YPL066WQ12194 479 aa3.96□□□□□ -1.78
TRS85YDR108W YPL119C-AQ3E751 87 aa3.96□□□□□ -1.78
TRS85YDR108W SUS1Q6WNK7 96 aa3.96□□□□□ -1.78
TRS85YDR108W CAN1P04817 590 aa3.95□□□□□ -1.78
TRS85YDR108W CKA1P15790 372 aa3.95□□□□□ -1.78
TRS85YDR108W SPO7P18410 259 aa3.95□□□□□ -1.78
TRS85YDR108W HOP1P20050 605 aa3.95□□□□□ -1.78
TRS85YDR108W MNE1P24720 663 aa3.95□□□□□ -1.78
TRS85YDR108W COQ3P27680 312 aa3.95□□□□□ -1.78
TRS85YDR108W GMH1P36125 273 aa3.95□□□□□ -1.78
TRS85YDR108W ATG8P38182 117 aaRIP-Chip data3.95□□□□□ -1.78not detected
TRS85YDR108W HSL7P38274 827 aa3.95□□□□□ -1.78
TRS85YDR108W ARN1P38731 627 aa3.95□□□□□ -1.78
TRS85YDR108W NIT2P47016 307 aa3.95□□□□□ -1.78
TRS85YDR108W COG7P53195 279 aa3.95□□□□□ -1.78
TRS85YDR108W YGR053CP53234 283 aa3.95□□□□□ -1.78
TRS85YDR108W SPR6Q01684 191 aa3.95□□□□□ -1.78
TRS85YDR108W NUP116Q02630 1113 aa3.95□□□□□ -1.78
TRS85YDR108W YDC1Q02896 317 aa3.95□□□□□ -1.78
TRS85YDR108W SNO1Q03144 224 aa3.95□□□□□ -1.78
TRS85YDR108W CTL1Q03220 320 aaKnown RBP3.95□□□□□ -1.78
TRS85YDR108W SPC19Q03954 165 aa3.95□□□□□ -1.78
TRS85YDR108W IZH3Q07959 543 aa3.95□□□□□ -1.78
TRS85YDR108W FDH1Q08911 376 aa3.95□□□□□ -1.78
TRS85YDR108W RAD28Q12021 506 aa3.95□□□□□ -1.78
TRS85YDR108W PST2Q12335 198 aaKnown RBP3.95□□□□□ -1.78
TRS85YDR108W PFK27Q12471 397 aaPredicted RBP3.95□□□□□ -1.78
TRS85YDR108W VMA9Q3E7B6 73 aa3.95□□□□□ -1.78
TRS85YDR108W MEX67Q99257 599 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms