RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 ASIC2Q16515 512 aa19.58■□□□□ 0.72
PHGDH-226ENST00000641756 KLHDC7AQ5VTJ3 777 aa19.58■□□□□ 0.72
PHGDH-226ENST00000641756 PAPD7Q5XG87 772 aaKnown RBP19.58■□□□□ 0.72
PHGDH-226ENST00000641756 TMCO3Q6UWJ1 677 aa19.58■□□□□ 0.72
PHGDH-226ENST00000641756 HS2ST1Q7LGA3 356 aa19.58■□□□□ 0.72
PHGDH-226ENST00000641756 DRC1Q96MC2 740 aa19.58■□□□□ 0.72
PHGDH-226ENST00000641756 GBP3Q9H0R5 595 aa19.58■□□□□ 0.72
PHGDH-226ENST00000641756 PNMA2Q9UL42 364 aa19.58■□□□□ 0.72
PHGDH-226ENST00000641756 UCHL3P15374 230 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 YWHABP31946 246 aaKnown RBP19.57■□□□□ 0.72
PHGDH-226ENST00000641756 KLHL30Q0D2K2 578 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 TMEM132BQ14DG7 1078 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 UTP14CQ5TAP6 766 aaKnown RBP19.57■□□□□ 0.72
PHGDH-226ENST00000641756 DLK2Q6UY11 383 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 SYCP3Q8IZU3 236 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 CAPZA3Q96KX2 299 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 C12orf42Q96LP6 360 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.57■□□□□ 0.72
PHGDH-226ENST00000641756 ANKZF1Q9H8Y5 726 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 TCEAL9Q9UHQ7 104 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 ZNF214Q9UL59 606 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-226ENST00000641756 NFIL3Q16649 462 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 GBP6Q6ZN66 633 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 CCDC43Q96MW1 224 aaKnown RBP19.57■□□□□ 0.72
PHGDH-226ENST00000641756 PLCB1Q9NQ66 1216 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 AIPL1Q9NZN9 384 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 GCNT4Q9P109 453 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 SALL4Q9UJQ4 1053 aa19.57■□□□□ 0.72
PHGDH-226ENST00000641756 DBR1Q9UK59 544 aaKnown RBP19.57■□□□□ 0.72
PHGDH-226ENST00000641756 AJAP1Q9UKB5 411 aaPredicted RBP19.57■□□□□ 0.72
PHGDH-226ENST00000641756 C19orf81C9J6K1 198 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 BACH1O14867 736 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 TACC1O75410 805 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 PPP1R37O75864 691 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 NR3C2P08235 984 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 RHOXF2BP0C7M4 288 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 GJB7Q6PEY0 223 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 SPAG5Q96R06 1193 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 RHOXF2Q9BQY4 288 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 STRA6Q9BX79 667 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 SIX2Q9NPC8 291 aa19.56■□□□□ 0.72
PHGDH-226ENST00000641756 RBAK-RBAKDNI3L0D1 243 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 PPP1R12BO60237 982 aaPredicted RBP19.55■□□□□ 0.72
PHGDH-226ENST00000641756 CCND2P30279 289 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 PLA2G4FQ68DD2 849 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 NOA1Q8NC60 698 aaKnown RBP19.55■□□□□ 0.72
PHGDH-226ENST00000641756 TRIM58Q8NG06 486 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 TMOD4Q9NZQ9 345 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 ANO9A1A5B4 782 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 TISP43B9A030 160 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 ZNF185O15231 689 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 PJA2O43164 708 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 ZRANB2O95218 330 aaKnown RBP eCLIP19.55■□□□□ 0.72
PHGDH-226ENST00000641756 LYPLA2O95372 231 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 VSIG10LQ86VR7 867 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 GPC2Q8N158 579 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 RDH13Q8NBN7 331 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 MMS19Q96T76 1030 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 GPRC5CQ9NQ84 441 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 DMAC2Q9NW81 257 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 LARSQ9P2J5 1176 aaKnown RBP19.55■□□□□ 0.72
PHGDH-226ENST00000641756 ADAMTS5Q9UNA0 930 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 FRMD4BQ9Y2L6 1034 aa19.55■□□□□ 0.72
PHGDH-226ENST00000641756 A0A087X0T9 212 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 WDR64B1ANS9 1081 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 BUB1O43683 1085 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 FAM228BP0C875 321 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 JAK3P52333 1124 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 NPEPPSP55786 919 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 PSMC5P62195 406 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 CC2D1AQ6P1N0 951 aaPredicted RBP19.54■□□□□ 0.72
PHGDH-226ENST00000641756 RBM46Q8TBY0 533 aaKnown RBP19.54■□□□□ 0.72
PHGDH-226ENST00000641756 PNKPQ96T60 521 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 MKNK1Q9BUB5 465 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 ADAMTS1Q9UHI8 967 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 POLR2AP24928 1970 aaKnown RBP19.54■□□□□ 0.72
PHGDH-226ENST00000641756 EXOC3O60645 756 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 TRIM49P0CI25 452 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 TRIM49CP0CI26 452 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 KRT76Q01546 638 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 SLC18A3Q16572 532 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 C4orf19Q8IY42 314 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 PCIF1Q9H4Z3 704 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 AFG3L2Q9Y4W6 797 aa19.54■□□□□ 0.72
PHGDH-226ENST00000641756 PLS3P13797 630 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 OAZ1P54368 228 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 BMS1Q14692 1282 aaKnown RBP19.53■□□□□ 0.72
PHGDH-226ENST00000641756 XKR9Q5GH70 373 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 IRF2BP2Q7Z5L9 587 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 NLRX1Q86UT6 975 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 JRKLQ9Y4A0 524 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 MYH10P35580 1976 aa19.53■□□□□ 0.72
PHGDH-226ENST00000641756 SPDYE16A6NNV3 312 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 SORBS3O60504 671 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 PNMA6AP0CW24 399 aaPredicted RBP19.52■□□□□ 0.72
PHGDH-226ENST00000641756 LMNB1P20700 586 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 SFNP31947 248 aa19.52■□□□□ 0.72
PHGDH-226ENST00000641756 FMO5P49326 533 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms