RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SLC39A11Q8N1S5 342 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 NME8Q8N427 588 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 SEMA4AQ9H3S1 761 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 ATP6V0A4Q9HBG4 840 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 C1orf112Q9NSG2 853 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 TMEM161AQ9NX61 479 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 DLGAP2Q9P1A6 1054 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 UBIAD1Q9Y5Z9 338 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 DOCK5Q9H7D0 1870 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 DENND3A2RUS2 1198 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 M0QZ92 97 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 DCNP07585 359 aaKnown RBP11.13□□□□□ -0.63
PHGDH-212ENST00000641247 GLULP15104 373 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 KLRC1P26715 233 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 SMC1AQ14683 1233 aaKnown RBP11.13□□□□□ -0.63
PHGDH-212ENST00000641247 SPECC1Q5M775 1068 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 ANKRD45Q5TZF3 282 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 CHD1LQ86WJ1 897 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 GIMAP8Q8ND71 665 aaPredicted RBP11.13□□□□□ -0.63
PHGDH-212ENST00000641247 SMARCC2Q8TAQ2 1214 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 RUBCNQ92622 972 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 HINFPQ9BQA5 517 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 TMEM117Q9H0C3 514 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 ELAC1Q9H777 363 aaKnown RBP11.13□□□□□ -0.63
PHGDH-212ENST00000641247 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 FBXL21Q9UKT6 434 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 DMXL1Q9Y485 3027 aa11.13□□□□□ -0.63
PHGDH-212ENST00000641247 LRRN2O75325 713 aa11.12□□□□□ -0.63
PHGDH-212ENST00000641247 SDSP20132 328 aa11.12□□□□□ -0.63
PHGDH-212ENST00000641247 KRT17Q04695 432 aa11.12□□□□□ -0.63
PHGDH-212ENST00000641247 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
PHGDH-212ENST00000641247 GPR149Q86SP6 731 aa11.12□□□□□ -0.63
PHGDH-212ENST00000641247 ST13P5Q8NFI4 369 aaPredicted RBP11.12□□□□□ -0.63
PHGDH-212ENST00000641247 BCL7CQ8WUZ0 217 aaPredicted RBP11.12□□□□□ -0.63
PHGDH-212ENST00000641247 OSMRQ99650 979 aa11.12□□□□□ -0.63
PHGDH-212ENST00000641247 CA14Q9ULX7 337 aa11.12□□□□□ -0.63
PHGDH-212ENST00000641247 DCDC2BA2VCK2 349 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 GPR32O75388 356 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 RPLP2P05387 115 aaKnown RBP11.11□□□□□ -0.63
PHGDH-212ENST00000641247 CA8P35219 290 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 METAP2P50579 478 aaKnown RBP eCLIP11.11□□□□□ -0.631e-6■■□□□ 12.1
PHGDH-212ENST00000641247 STAT5BP51692 787 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 TROAPQ12815 778 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 ST3GAL2Q16842 350 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 XRRA1Q6P2D8 792 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 UBAC1Q9BSL1 405 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 VN1R3Q9BXE9 311 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 IL25Q9H293 177 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 JADE2Q9NQC1 790 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
PHGDH-212ENST00000641247 WNT16Q9UBV4 365 aa11.11□□□□□ -0.63
PHGDH-212ENST00000641247 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-212ENST00000641247 GPR179Q6PRD1 2367 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 STK25O00506 426 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 GPR182O15218 404 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 ATG7O95352 703 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 ATP4AP20648 1035 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 TGM1P22735 817 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 ACTR2P61160 394 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 ITGB3BPQ13352 177 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-212ENST00000641247 MTMR1Q13613 665 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 UBE2SQ16763 222 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 PLPPR4Q7Z2D5 763 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 LRRC43Q8N309 656 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 SLC44A3Q8N4M1 653 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 RILPL2Q969X0 211 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 LNPKQ9C0E8 428 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 TBC1D17Q9HA65 648 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 JPH1Q9HDC5 661 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-212ENST00000641247 SLC9A2Q9UBY0 812 aa11.1□□□□□ -0.63
PHGDH-212ENST00000641247 IGKV6D-21A0A0A0MT36 114 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-212ENST00000641247 CCNE2O96020 404 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 VTNP04004 478 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 PPM1AP35813 382 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 NT5C2P49902 561 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 CRYBB1P53674 252 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-212ENST00000641247 BCAR1P56945 870 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 TBC1D8BQ0IIM8 1120 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 WTAPQ15007 396 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 CWC27Q6UX04 472 aaKnown RBP11.09□□□□□ -0.63
PHGDH-212ENST00000641247 OTOP3Q7RTS5 596 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 ZNF598Q86UK7 904 aaKnown RBP11.09□□□□□ -0.63
PHGDH-212ENST00000641247 HELQQ8TDG4 1101 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 GPR152Q8TDT2 470 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 ACSF2Q96CM8 615 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-212ENST00000641247 ZNF668Q96K58 619 aaPredicted RBP11.09□□□□□ -0.63
PHGDH-212ENST00000641247 FOXQ1Q9C009 403 aa11.09□□□□□ -0.63
PHGDH-212ENST00000641247 KRT23Q9C075 422 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms