RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 SPECC1Q5M775 1068 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 MCTP2Q6DN12 878 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 METTL7BQ6UX53 244 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 C4orf32Q8N8J7 132 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 TBCKQ8TEA7 893 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 TOP1MTQ969P6 601 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 CCDC34Q96HJ3 373 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 PSTPIP2Q9H939 334 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 TMEM260Q9NX78 707 aa13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 HOOK1Q9UJC3 728 aaKnown RBP13.33□□□□□ -0.28
ERGIC3-220ENST00000640748 COL4A6Q14031 1691 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 VWA3AA6NCI4 1184 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 CAND2O75155 1236 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 KCNA5P22460 613 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 LONP1P36776 959 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 PRPHP41219 470 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 ZRSR1Q15695 479 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 LETM2Q2VYF4 491 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 EPC2Q52LR7 807 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 TMEM31Q5JXX7 168 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 KANK3Q6NY19 840 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 CNNM3Q8NE01 707 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 MRPL38Q96DV4 380 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 FAM122AQ96E09 287 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 NAP1L4Q99733 375 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 PYM1Q9BRP8 204 aaKnown RBP13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 ANO10Q9NW15 660 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 USP25Q9UHP3 1055 aa13.32□□□□□ -0.28
ERGIC3-220ENST00000640748 FAM86C2PA6NEL3 165 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 PI4K2BG5E9Z4 385 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 NOP56O00567 594 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 POLR2DO15514 142 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 CCNT1O60563 726 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 GPR37L1O60883 481 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 STAM2O75886 525 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 LINC00271P0C7V0 271 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 IL9P15248 144 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 NEDD9Q14511 834 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 UBE2SQ16763 222 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 GNPTABQ3T906 1256 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 ANO6Q4KMQ2 910 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 FAM26DQ5JW98 314 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 TEX2Q8IWB9 1127 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 FAM178BQ8IXR5 827 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 FAM200AQ8TCP9 573 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 NEK9Q8TD19 979 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 LMBR1Q8WVP7 490 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 SEPT8Q92599 483 aa13.31□□□□□ -0.28
ERGIC3-220ENST00000640748 H3BNC9 293 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 MEIS2O14770 477 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 NEMFO60524 1076 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 CHRNA1P02708 482 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 OR52Z1P0C646 297 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 TXLNAP40222 546 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 AP3B2Q13367 1082 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 LONRF3Q496Y0 759 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 PCNX4Q63HM2 1172 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 USP17L6PQ6QN14 398 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 YME1L1Q96TA2 773 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 ARIH1Q9Y4X5 557 aaPredicted RBP13.3□□□□□ -0.28
ERGIC3-220ENST00000640748 DOCK5Q9H7D0 1870 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 UPP2O95045 317 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 FOSP01100 380 aaPredicted RBP13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 NLRP12P59046 1061 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 TCEAL5Q5H9L2 206 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 UTP14CQ5TAP6 766 aaKnown RBP13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 PTCRAQ6ISU1 281 aaPredicted RBP13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 USP49Q70CQ1 688 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 GJD3Q8N144 294 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 EPSTI1Q96J88 318 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 SENP7Q9BQF6 1050 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 DNAJC25Q9H1X3 360 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 RC3H2Q9HBD1 1191 aaKnown RBP13.29□□□□□ -0.28
ERGIC3-220ENST00000640748 MYO7AQ13402 2215 aa13.28□□□□□ -0.28
ERGIC3-220ENST00000640748 H3BQ06 376 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-220ENST00000640748 ACTN4O43707 911 aaKnown RBP13.28□□□□□ -0.28
ERGIC3-220ENST00000640748 ATP9AO75110 1047 aa13.28□□□□□ -0.28
ERGIC3-220ENST00000640748 GNAT1P11488 350 aa13.28□□□□□ -0.28
ERGIC3-220ENST00000640748 GCFC2P16383 781 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms