RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
MECP2-226ENST00000640414 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
MECP2-226ENST00000640414 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
MECP2-226ENST00000640414 FBXL21Q9UKT6 434 aa13.16□□□□□ -0.3
MECP2-226ENST00000640414 DUSP12Q9UNI6 340 aa13.16□□□□□ -0.3
MECP2-226ENST00000640414 KDM3AQ9Y4C1 1321 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 C2orf71A6NGG8 1288 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 C9IYK1 514 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
MECP2-226ENST00000640414 FGFR1P11362 822 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 PBX3P40426 434 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 TRDNQ13061 729 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
MECP2-226ENST00000640414 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 KCNT2Q6UVM3 1135 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
MECP2-226ENST00000640414 ENAHQ8N8S7 591 aaPredicted RBP13.15□□□□□ -0.3
MECP2-226ENST00000640414 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.3
MECP2-226ENST00000640414 GLG1Q92896 1179 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 TCEANC2Q96MN5 208 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 ADAM2Q99965 735 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 KRT23Q9C075 422 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 C1orf112Q9NSG2 853 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 ZSWIM5Q9P217 1185 aa13.15□□□□□ -0.3
MECP2-226ENST00000640414 FANCMQ8IYD8 2048 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 RRN3P2A6NIE6 340 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 ATP9AO75110 1047 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
MECP2-226ENST00000640414 ATXN1P54253 815 aaKnown RBP13.14□□□□□ -0.31
MECP2-226ENST00000640414 ANTXR2P58335 489 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 KRT76Q01546 638 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 SLC35G1Q2M3R5 365 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 LRRC55Q6ZSA7 311 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 CYB5R4Q7L1T6 521 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
MECP2-226ENST00000640414 GIMAP8Q8ND71 665 aaPredicted RBP13.14□□□□□ -0.31
MECP2-226ENST00000640414 TRAPPC12Q8WVT3 735 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 SEPT1Q8WYJ6 367 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 PIGSQ96S52 555 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 LRRC2Q9BYS8 371 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 KCNK12Q9HB15 430 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 NOC2LQ9Y3T9 749 aaKnown RBP13.14□□□□□ -0.31
MECP2-226ENST00000640414 PCDHA2Q9Y5H9 948 aa13.14□□□□□ -0.31
MECP2-226ENST00000640414 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 NARSO43776 548 aaKnown RBP13.13□□□□□ -0.31
MECP2-226ENST00000640414 SP9P0CG40 484 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 KCNA2P16389 499 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 MCM5P33992 734 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
MECP2-226ENST00000640414 KRT17Q04695 432 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 XRRA1Q6P2D8 792 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 ZC3H14Q6PJT7 736 aaKnown RBP13.13□□□□□ -0.31
MECP2-226ENST00000640414 SUMF1Q8NBK3 374 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 SNX21Q969T3 373 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 ACSF2Q96CM8 615 aaPredicted RBP13.13□□□□□ -0.31
MECP2-226ENST00000640414 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 PCYT2Q99447 389 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
MECP2-226ENST00000640414 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 MAD2L2Q9UI95 211 aa13.13□□□□□ -0.31
MECP2-226ENST00000640414 MAP1BP46821 2468 aaKnown RBP13.12□□□□□ -0.31
MECP2-226ENST00000640414 KRBA1A5PL33 1030 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 STK25O00506 426 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 PRC1O43663 620 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 CFHP08603 1231 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 EPCAMP16422 314 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 PPM1AP35813 382 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 FAM189BP81408 668 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 PCNX4Q63HM2 1172 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 TMC5Q6UXY8 1006 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 Q6ZUG5 572 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 OTOP3Q7RTS5 596 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 TMEM40Q8WWA1 233 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 CASD1Q96PB1 797 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 CDHR5Q9HBB8 845 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 DZANK1Q9NVP4 752 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 SPG21Q9NZD8 308 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 WNT16Q9UBV4 365 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 ST3GAL5Q9UNP4 418 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 GINS2Q9Y248 185 aa13.12□□□□□ -0.31
MECP2-226ENST00000640414 SMIM35A0A1B0GVV1 85 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
MECP2-226ENST00000640414 CA8P35219 290 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 NT5C2P49902 561 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 AK2P54819 239 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 TRAF1Q13077 416 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 TOB2Q14106 344 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms