RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 CHRNEQ04844 493 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 CHAF1AQ13111 956 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 DUSP4Q13115 394 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 OS9Q13438 667 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 SNX17Q15036 470 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 NBPF9Q3BBW0 867 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 TBC1D10BQ4KMP7 808 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 TNNI3KQ59H18 835 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 CAVIN4Q5BKX8 364 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 NBPF12Q5TAG4 269 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 STRIP1Q5VSL9 837 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 CWC27Q6UX04 472 aaKnown RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 CCDC129Q6ZRS4 1044 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 NOL8Q76FK4 1167 aaKnown RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 ZNF589Q86UQ0 364 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 VPS37DQ86XT2 251 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 HSCBQ8IWL3 235 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 CERS5Q8N5B7 392 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 TDRD7Q8NHU6 1098 aaKnown RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 ENOX1Q8TC92 643 aaKnown RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 SYTL5Q8TDW5 730 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 LPIN2Q92539 896 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 ZNF512BQ96KM6 892 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 GMLQ99445 158 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 UPF3BQ9BZI7 483 aaKnown RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 GZF1Q9H116 711 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 GCM1Q9NP62 436 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 ECHDC1Q9NTX5 307 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 PCDHAC2Q9Y5I4 1007 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 FPGT-TNNI3KV9GXZ4 949 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 ASTN2O75129 1339 aaPredicted RBP7.19□□□□□ -1.26
ATM-229ENST00000639953 AK9Q5TCS8 1911 aa7.19□□□□□ -1.26
ATM-229ENST00000639953 ZNF609O15014 1411 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 COL1A1P02452 1464 aaPredicted RBP7.18□□□□□ -1.26
ATM-229ENST00000639953 A0A1B0GUL7 405 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 TMEM82A0PJX8 343 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 PEX10O60683 326 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 RPS12P25398 132 aaKnown RBP7.18□□□□□ -1.26
ATM-229ENST00000639953 CLCQ05315 142 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 RAB3GAP1Q15042 981 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 RABEP1Q15276 862 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 DLK2Q6UY11 383 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 RNF111Q6ZNA4 994 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 NLRX1Q86UT6 975 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 KIAA0825Q8IV33 1275 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 DAGLBQ8NCG7 672 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 AGBL3Q8NEM8 1001 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 DPF2Q92785 391 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 TTC14Q96N46 770 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 NEUROD6Q96NK8 337 aa7.18□□□□□ -1.26
ATM-229ENST00000639953 ADARB2Q9NS39 739 aaKnown RBP7.18□□□□□ -1.26
ATM-229ENST00000639953 SCAF8Q9UPN6 1271 aaKnown RBP7.18□□□□□ -1.26
ATM-229ENST00000639953 H7C1D1 291 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 FKTNO75072 461 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 ATE1O95260 518 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 INHBBP09529 407 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 SDHBP21912 280 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 NEK4P51957 841 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 HTRA3P83110 453 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 OVOS1Q6IE37 1185 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 GK5Q6ZS86 529 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 USP50Q70EL3 339 aaPredicted RBP7.17□□□□□ -1.26
ATM-229ENST00000639953 RUFY3Q7L099 469 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 PNMA8AQ86V59 439 aaPredicted RBP7.17□□□□□ -1.26
ATM-229ENST00000639953 LDHDQ86WU2 507 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 CLASRPQ8N2M8 674 aaKnown RBP7.17□□□□□ -1.26
ATM-229ENST00000639953 SMC1BQ8NDV3 1235 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 ATG4CQ96DT6 458 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 TMX3Q96JJ7 454 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 LRRC3Q9BY71 257 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 KRTAP4-2Q9BYR5 136 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 PRDM14Q9GZV8 571 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATM-229ENST00000639953 MYOZ2Q9NPC6 264 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 UBP1Q9NZI7 540 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 GMIPQ9P107 970 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 ADAMTS1Q9UHI8 967 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 TCFL5Q9UL49 500 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 TTC41PQ6P2S7 1318 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 FAM205AQ6ZU69 1335 aa7.17□□□□□ -1.26
ATM-229ENST00000639953 MYO5AQ9Y4I1 1855 aaKnown RBP7.17□□□□□ -1.26
ATM-229ENST00000639953 TEX51A0A1B0GUA7 166 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 TRAF5O00463 557 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 FOXP2O15409 715 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 GLRX3O76003 335 aaKnown RBP7.16□□□□□ -1.26
ATM-229ENST00000639953 SYPP08247 313 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 IFIT2P09913 472 aaKnown RBP7.16□□□□□ -1.26
ATM-229ENST00000639953 ZNF280AP59817 542 aaPredicted RBP7.16□□□□□ -1.26
ATM-229ENST00000639953 CUL4AQ13619 759 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 RASGRF1Q13972 1273 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 NECTIN1Q15223 517 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 SLC14A2Q15849 920 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 SEZ6Q53EL9 994 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 MFSD14BQ5SR56 506 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 ADGRF1Q5T601 910 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 CDCP2Q5VXM1 449 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 GAS2L3Q86XJ1 694 aa7.16□□□□□ -1.26
ATM-229ENST00000639953 CNTROBQ8N137 903 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms