RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PHBP35232 272 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 QARSP47897 775 aaKnown RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 SUPT20HL1Q3ZLR7 823 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 MSTO1Q9BUK6 570 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 MRPL47Q9HD33 250 aaKnown RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 PABPN1LA6NDY0 278 aaKnown RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 FTLP02792 175 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 RWDD2BP57060 319 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 SEC23AQ15436 765 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 LDHDQ86WU2 507 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 NOA1Q8NC60 698 aaKnown RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 MS4A14Q96JA4 679 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 FAM213AQ9BRX8 229 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 KRT1P04264 644 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 PRPF38AQ8NAV1 312 aaKnown RBP15.55■□□□□ 0.08
SCARB2-216ENST00000639300 CCDC197Q8NCU1 140 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 BBOF1Q8ND07 529 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 ANKRD7Q92527 254 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 HAUS1Q96CS2 278 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 JMJD4Q9H9V9 463 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 RNF146Q9NTX7 359 aa15.55■□□□□ 0.08
SCARB2-216ENST00000639300 SPATA31D1Q6ZQQ2 1576 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 WTIPA6NIX2 430 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 WDR64B1ANS9 1081 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 CIB2O75838 187 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 IFRD2Q12894 506 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 NCAPHQ15003 741 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 TRIM50Q86XT4 487 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 REXO1L1PQ8IX06 675 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 SNX12Q9UMY4 172 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 P4HBP07237 508 aaKnown RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 ILDR1Q86SU0 546 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 RFX6Q8HWS3 928 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 TRIM11Q96F44 468 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 A0A1B0GUA9 196 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 VAMP7P51809 220 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 SNRNP48Q6IEG0 339 aaKnown RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 RPUSD2Q8IZ73 545 aaKnown RBP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.54■□□□□ 0.08
SCARB2-216ENST00000639300 TCP11Q8WWU5 503 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 ADAM22Q9P0K1 906 aa15.54■□□□□ 0.08
SCARB2-216ENST00000639300 GPR75-ASB3A0A0A6YYF3 556 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 CTIFO43310 598 aaKnown RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 CLNS1AP54105 237 aaKnown RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 EARS2Q5JPH6 523 aaKnown RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 COG1Q8WTW3 980 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 RIN2Q8WYP3 895 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 CRAMP1Q96RY5 1269 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 WRNIP1Q96S55 665 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 SEPT10Q9P0V9 454 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 CUL1Q13616 776 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 Q3C1V9 767 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 GLE1Q53GS7 698 aaKnown RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 DPY19L2Q6NUT2 758 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 DPP9Q86TI2 863 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 ZNF710Q8N1W2 664 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 NME8Q8N427 588 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 LRRC8CQ8TDW0 803 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 GABBR1Q9UBS5 961 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 EMSYQ7Z589 1322 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 ITSN1Q15811 1721 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 SMIM22K7EJ46 135 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 SLC9A1P19634 815 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 GPC5P78333 572 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 ALCAMQ13740 583 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 SWSAP1Q6NVH7 229 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 REEP2Q9BRK0 252 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 C11orf70Q9BRQ4 267 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 MED10Q9BTT4 135 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 AMACRQ9UHK6 382 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 MROH1Q8NDA8 1641 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 SUN1O94901 812 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 BASP1P80723 227 aaKnown RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 LMNB2Q03252 620 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 TFDP1Q14186 410 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 TMED2Q15363 201 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 DALRD3Q5D0E6 543 aaKnown RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 SPATS2Q86XZ4 545 aaKnown RBP15.53■□□□□ 0.08
SCARB2-216ENST00000639300 MAD2L2Q9UI95 211 aa15.53■□□□□ 0.08
SCARB2-216ENST00000639300 EYA4O95677 639 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 SEMA3FQ13275 785 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 ZNF772Q68DY9 489 aaPredicted RBP15.52■□□□□ 0.08
SCARB2-216ENST00000639300 HAUS6Q7Z4H7 955 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 MAP7D3Q8IWC1 876 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 ATP2A3Q93084 1043 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 TBC1D22BQ9NU19 505 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 ITIH6Q6UXX5 1313 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 HIP1RO75146 1068 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 EDEM3Q9BZQ6 932 aa15.52■□□□□ 0.08
SCARB2-216ENST00000639300 INTS2Q9H0H0 1204 aaKnown RBP15.52■□□□□ 0.08
SCARB2-216ENST00000639300 M0QZ92 97 aa15.52■□□□□ 0.07
SCARB2-216ENST00000639300 ZRANB2O95218 330 aaKnown RBP eCLIP15.52■□□□□ 0.07
SCARB2-216ENST00000639300 SAT1P21673 171 aa15.52■□□□□ 0.07
SCARB2-216ENST00000639300 BBS9Q3SYG4 887 aa15.52■□□□□ 0.07
SCARB2-216ENST00000639300 TMEM270Q6UE05 265 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms