RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 IKZF4Q9H2S9 585 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 DDX4Q9NQI0 724 aaKnown RBP11.87□□□□□ -0.51
SNIP1-204ENST00000638725 PNMA2Q9UL42 364 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 PDXKO00764 312 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 EVI5O60447 810 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 CAND2O75155 1236 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 ABCB4P21439 1286 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 CDR1P51861 262 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 CPLX4Q7Z7G2 160 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 FMO2Q99518 471 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 TYW1Q9NV66 732 aaKnown RBP11.87□□□□□ -0.51
SNIP1-204ENST00000638725 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 PPP1R9AQ9ULJ8 1098 aa11.87□□□□□ -0.51
SNIP1-204ENST00000638725 DDX3YO15523 660 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SHBGP04278 402 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 DRD4P21917 467 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 QRICH1Q2TAL8 776 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 PRR16Q569H4 304 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 CYB5D1Q6P9G0 228 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 FUKQ8N0W3 1084 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SYT2Q8N9I0 419 aaPredicted RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SLC35G2Q8TBE7 412 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 TLCD1Q96CP7 247 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 ERVK-5Q9HDB9 667 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 INTUQ9ULD6 942 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 DNM3Q9UQ16 869 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 PPFIA2O75334 1257 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 GCNT3O95395 438 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 FERP16591 822 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 IBSPP21815 317 aaPredicted RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 ANXA13P27216 316 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 RDXP35241 583 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SCTRP47872 440 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 NPEPPSP55786 919 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 CYP4A11Q02928 519 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SF3A3Q12874 501 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 ZNF211Q13398 564 aaPredicted RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 GKAP1Q5VSY0 366 aaPredicted RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SLF2Q8IX21 1173 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 ETNPPLQ8TBG4 499 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 P2RX7Q99572 595 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 TXLNGYQ9BZA5 131 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
SNIP1-204ENST00000638725 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 GGA1Q9UJY5 639 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 ATP8B3O60423 1300 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
SNIP1-204ENST00000638725 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 STAT1P42224 750 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 SLC30A5Q8TAD4 765 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 XPO6Q96QU8 1125 aaKnown RBP11.85□□□□□ -0.51
SNIP1-204ENST00000638725 RUSC1Q9BVN2 902 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 EPB41L4BQ9H329 900 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 SERPINB13Q9UIV8 391 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 PCDHA1Q9Y5I3 950 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 SPDYE3A6NKU9 549 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 OPLAHO14841 1288 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 RPA1P27694 616 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 POLD1P28340 1107 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 SHMT1P34896 483 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 PTENP60484 403 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 ARHGAP4P98171 946 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 DR1Q01658 176 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 PPATQ06203 517 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 FAM228AQ86W67 206 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 PARP9Q8IXQ6 854 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 RFFLQ8WZ73 363 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 CCT6BQ92526 530 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 GLG1Q92896 1179 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 ARHGEF26Q96DR7 871 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 CHMP6Q96FZ7 201 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 MBOAT7Q96N66 472 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 RAB17Q9H0T7 212 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 BHMT2Q9H2M3 363 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 ZDHHC18Q9NUE0 388 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 TTC7AQ9ULT0 858 aaPredicted RBP11.85□□□□□ -0.51
SNIP1-204ENST00000638725 NCANO14594 1321 aa11.85□□□□□ -0.51
SNIP1-204ENST00000638725 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SLC16A3O15427 465 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CTNND1O60716 968 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 ATP2B4P23634 1241 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CYP3A7P24462 503 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 RPL13P26373 211 aaKnown RBP11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SOX5P35711 763 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SNCBQ16143 134 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 ERMARDQ5T6L9 678 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 DUPD1Q68J44 220 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
SNIP1-204ENST00000638725 SELENOSQ9BQE4 189 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms