RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 O00370 1275 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 MAP3K13O43283 966 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 BBOX1O75936 387 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
GFAP-228ENST00000638488 MAGEA1P43355 309 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 PTGDRQ13258 359 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 PFKFB3Q16875 520 aaPredicted RBP13.16□□□□□ -0.3
GFAP-228ENST00000638488 TSNAXIP1Q2TAA8 658 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 PABPC1LQ4VXU2 614 aaKnown RBP13.16□□□□□ -0.3
GFAP-228ENST00000638488 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 TMEM154Q6P9G4 183 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 STAMQ92783 540 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 TUBGCP2Q9BSJ2 902 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 MXD3Q9BW11 206 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 RNPEPL1Q9HAU8 725 aa13.16□□□□□ -0.3
GFAP-228ENST00000638488 DNAAF2Q9NVR5 837 aaKnown RBP13.16□□□□□ -0.3
GFAP-228ENST00000638488 A8MUI8 341 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 F8VZ95 297 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 SNX3O60493 162 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 MYL1P05976 194 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 CALB2P22676 271 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 PDE6CP51160 858 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 PLS1Q14651 629 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 MYBPC3Q14896 1274 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 CFAP61Q8NHU2 1237 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 MDM1Q8TC05 714 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.3
GFAP-228ENST00000638488 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 FGD4Q96M96 766 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 MMADHCQ9H3L0 296 aaPredicted RBP13.15□□□□□ -0.3
GFAP-228ENST00000638488 AKR1B10O60218 316 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 IL1R1P14778 569 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 RASA1P20936 1047 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 CD151P48509 253 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 PPP4CP60510 307 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 TMC3Q7Z5M5 1100 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 LCA5Q86VQ0 697 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 DGKHQ86XP1 1220 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 EYA3Q99504 573 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 FAM192AQ9GZU8 254 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 BLZF1Q9H2G9 400 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 ATXN10Q9UBB4 475 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 SALL4Q9UJQ4 1053 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 TMCO1Q9UM00 188 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 ZNF232Q9UNY5 417 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
GFAP-228ENST00000638488 FLT1P17948 1338 aa13.15□□□□□ -0.3
GFAP-228ENST00000638488 PLEKP08567 350 aaPredicted RBP13.14□□□□□ -0.31
GFAP-228ENST00000638488 EIF4A3P38919 411 aaKnown RBP13.14□□□□□ -0.31
GFAP-228ENST00000638488 CDK8P49336 464 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 SETDB1Q15047 1291 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 FAM114A1Q8IWE2 563 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 ZSCAN29Q8IWY8 852 aaPredicted RBP13.14□□□□□ -0.31
GFAP-228ENST00000638488 PGM2Q96G03 612 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 RPS6KC1Q96S38 1066 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 UBE2OQ9C0C9 1292 aaKnown RBP13.14□□□□□ -0.31
GFAP-228ENST00000638488 VAT1LQ9HCJ6 419 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 MAD2L2Q9UI95 211 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 UPP2O95045 317 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 CCNB1P14635 433 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 PEX5P50542 639 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 POLE2P56282 527 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 DBN1Q16643 649 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.14□□□□□ -0.31
GFAP-228ENST00000638488 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 TNFRSF25Q93038 417 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 TRIM7Q9C029 511 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
GFAP-228ENST00000638488 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 GMEB1Q9Y692 573 aa13.14□□□□□ -0.31
GFAP-228ENST00000638488 TRIM49BA6NDI0 452 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 G3V3G9 751 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 PSMA7O14818 248 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 SUN1O94901 812 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
GFAP-228ENST00000638488 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
GFAP-228ENST00000638488 C2CD5Q86YS7 1000 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 MYLK4Q86YV6 388 aaPredicted RBP13.13□□□□□ -0.31
GFAP-228ENST00000638488 ENDOVQ8N8Q3 282 aaKnown RBP13.13□□□□□ -0.31
GFAP-228ENST00000638488 SH3TC2Q8TF17 1288 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 MKL1Q969V6 931 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
GFAP-228ENST00000638488 STK38LQ9Y2H1 464 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 FAM205AQ6ZU69 1335 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 RBAK-RBAKDNI3L0D1 243 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 KLK7P49862 253 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 SCNN1DP51172 638 aa13.13□□□□□ -0.31
GFAP-228ENST00000638488 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms