RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-259	ENST00000638114	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.84	■□□□□ 0.61
CACNA1A-259	ENST00000638114	TMX1	Q9H3N1	280 aa		18.84	■□□□□ 0.61
CACNA1A-259	ENST00000638114	ERVK-5	Q9HDB9	667 aa		18.84	■□□□□ 0.61
CACNA1A-259	ENST00000638114	VAV3	Q9UKW4	847 aa		18.84	■□□□□ 0.61
CACNA1A-259	ENST00000638114	TMEM150B	A6NC51	233 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	BTBD18	B2RXH4	712 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	EML1	O00423	815 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	TBX3	O15119	743 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	GPR182	O15218	404 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	GPR32	O75388	356 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	PSMC5	P62195	406 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	NPAS4	Q8IUM7	802 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	LINC01465	Q8N7H1	131 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	HAS1	Q92839	578 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ST3GAL5	Q9UNP4	418 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	NLRC5	Q86WI3	1866 aa		18.83	■□□□□ 0.6
CACNA1A-259	ENST00000638114	DENND3	A2RUS2	1198 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	DDX11L8	A8MPP1	907 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	BAG4	O95429	457 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	STAG3L1	P0CL83	205 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	NLRP11	P59045	1033 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	GUCY1B3	Q02153	619 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	BTG3	Q14201	252 aa	Predicted RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	TARBP2	Q15633	366 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	FAM228A	Q86W67	206 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	TMEM192	Q8IY95	271 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SLFN12	Q8IYM2	578 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ZNF668	Q96K58	619 aa	Predicted RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SCLT1	Q96NL6	688 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SH2D3A	Q9BRG2	576 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	NIFK	Q9BYG3	293 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	RC3H2	Q9HBD1	1191 aa	Known RBP	18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	LMCD1	Q9NZU5	365 aa		18.82	■□□□□ 0.6
CACNA1A-259	ENST00000638114	REV3L	O60673	3130 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	MGEA5	O60502	916 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	DGKI	O75912	1065 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	STBD1	O95210	358 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	CTNNB1	P35222	781 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	QARS	P47897	775 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	RBM25	P49756	843 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SAFB	Q15424	915 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	TJAP1	Q5JTD0	557 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	NCAPH2	Q6IBW4	605 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ZNF689	Q96CS4	500 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ADAM2	Q99965	735 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	LLPH	Q9BRT6	129 aa	Known RBP	18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ADAMTS10	Q9H324	1103 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	LRFN2	Q9ULH4	789 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	RALGAPA2	Q2PPJ7	1873 aa		18.81	■□□□□ 0.6
CACNA1A-259	ENST00000638114	DKC1	O60832	514 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SARS	P49591	514 aa	Known RBP	18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114	MRPS5	P82675	430 aa	Known RBP	18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114	GPM6B	Q13491	265 aa		18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114	PLA2G4F	Q68DD2	849 aa		18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114	FAM43B	Q6ZT52	329 aa	Predicted RBP	18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ZNF710	Q8N1W2	664 aa		18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114	C8orf76	Q96K31	380 aa		18.8	■□□□□ 0.6
CACNA1A-259	ENST00000638114		H3BNC9	293 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	P4HB	P07237	508 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	DNM2	P50570	870 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	GPC3	P51654	580 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	DRP2	Q13474	957 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	EPHA7	Q15375	998 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	CALCRL	Q16602	461 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	PTPRO	Q16827	1216 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	PAN2	Q504Q3	1202 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ANO5	Q75V66	913 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	CRIPAK	Q8N1N5	446 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	NLRP7	Q8WX94	980 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SYMPK	Q92797	1274 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ASB2	Q96Q27	587 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	CEP89	Q96ST8	783 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	UPF2	Q9HAU5	1272 aa	Known RBP	18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	RGS18	Q9NS28	235 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	C1orf112	Q9NSG2	853 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	RWDD3	Q9Y3V2	267 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	PCDHB7	Q9Y5E2	793 aa		18.79	■□□□□ 0.6
CACNA1A-259	ENST00000638114	WNT7A	O00755	349 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	NEMF	O60524	1076 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	EIF4B	P23588	611 aa	Known RBP	18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	BMPR1A	P36894	532 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	HMGN5	P82970	282 aa	Known RBP	18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SPIRE1	Q08AE8	756 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	RABEP1	Q15276	862 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	SLC24A5	Q71RS6	500 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	CMTR2	Q8IYT2	770 aa	Known RBP	18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	FAM184A	Q8NB25	1140 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	IL27	Q8NEV9	243 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	LXN	Q9BS40	222 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	CYP26B1	Q9NR63	512 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	RGL1	Q9NZL6	768 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114	VCAN	P13611	3396 aa		18.78	■□□□□ 0.6
CACNA1A-259	ENST00000638114		C9IYK1	514 aa		18.77	■□□□□ 0.6
CACNA1A-259	ENST00000638114	LINC00271	P0C7V0	271 aa		18.77	■□□□□ 0.6
CACNA1A-259	ENST00000638114	DARS	P14868	501 aa	Known RBP	18.77	■□□□□ 0.6
CACNA1A-259	ENST00000638114	ATP2B1	P20020	1258 aa		18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms