RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 MRPS9P82933 396 aaKnown RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 KIF23Q02241 960 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 STK4Q13043 487 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 TTF1Q15361 905 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 ADRM1Q16186 407 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 TBC1D10BQ4KMP7 808 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 ERMARDQ5T6L9 678 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 METTL21CQ5VZV1 264 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 CYP4X1Q8N118 509 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 LINC00301Q8NCQ3 95 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 RFWD2Q8NHY2 731 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 FNDC8Q8TC99 324 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 IRGQQ8WZA9 623 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 UQCC2Q9BRT2 126 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 GPHNQ9NQX3 736 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 EXOC7Q9UPT5 735 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 RBMX2Q9Y388 322 aaKnown RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 HEY1Q9Y5J3 304 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 ANKRD62A6NC57 917 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 TCP11X1B4DZS4 312 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 PFDN6O15212 129 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 FOXO3O43524 673 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 MAN1A2O60476 641 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 HAUS5O94927 633 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 CHKAP35790 457 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 HSD17B3P37058 310 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 MAGEA1P43355 309 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 EZH2Q15910 746 aaKnown RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 MMEL1Q495T6 779 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 IZUMO2Q6UXV1 221 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 BPHLQ86WA6 291 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 NME9Q86XW9 330 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 NUP93Q8N1F7 819 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 DIS3LQ8TF46 1054 aaKnown RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 DACT3Q96B18 629 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-216ENST00000637968 OTUD5Q96G74 571 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 TSG101Q99816 390 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 TMEM60Q9H2L4 133 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 ARHGEF3Q9NR81 526 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 TAB2Q9NYJ8 693 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 ZNF212Q9UDV6 495 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 FBXL5Q9UKA1 691 aa6.15□□□□□ -1.42
SCN1A-216ENST00000637968 A0A1B0GTH6 734 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 UNCXA6NJT0 531 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 RASA4BC9J798 803 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 RASA4O43374 803 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 TSPAN1O60635 241 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 ZWINTO95229 277 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 ZBED1O96006 694 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 SLC16A2P36021 539 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 OCRLQ01968 901 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 CETN1Q12798 172 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 NR1I3Q14994 352 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 RRAGBQ5VZM2 374 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 FNBP1Q96RU3 617 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 CCDC77Q9BR77 488 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 PITPNM3Q9BZ71 974 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 IFT122Q9HBG6 1241 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 EHD2Q9NZN4 543 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 PPP1R1BQ9UD71 204 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-216ENST00000637968 STAP2Q9UGK3 403 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 SPEF1Q9Y4P9 236 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 PRDM15P57071 1507 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-216ENST00000637968 ABCC5O15440 1437 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 ABCC12Q96J65 1359 aa6.15□□□□□ -1.43
SCN1A-216ENST00000637968 PCP4L1A6NKN8 68 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 NBPF26B4DH59 902 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 ADCY6O43306 1168 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 XPOTO43592 962 aaKnown RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 PAEPP09466 180 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 KRT10P13645 584 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 IL9RQ01113 521 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 PPARAQ07869 468 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 SPRED3Q2MJR0 410 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 ANKDD1AQ495B1 522 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 EAPPQ56P03 285 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 HAUS3Q68CZ6 603 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 ARHGEF18Q6ZSZ5 1173 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 CACTIN-AS1Q8N1I8 211 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 SH3TC2Q8TF17 1288 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 INPP5DQ92835 1189 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 ERP27Q96DN0 273 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 DNAJC1Q96KC8 554 aaKnown RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 CUEDC2Q9H467 287 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 PHAXQ9H814 394 aaKnown RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 FGFR1OP2Q9NVK5 253 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 POLR3EQ9NVU0 708 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 TRNAU1APQ9NX07 287 aaKnown RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 COMMD8Q9NX08 183 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 HESX1Q9UBX0 185 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 COMMD10Q9Y6G5 202 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 GPATCH8Q9UKJ3 1502 aaKnown RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 BICDL2A1A5D9 508 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 UNC5CO95185 931 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 CCNCP24863 283 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 PDAP1Q13442 181 aaKnown RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 PCNX4Q63HM2 1172 aa6.14□□□□□ -1.43
SCN1A-216ENST00000637968 RBM44Q6ZP01 1051 aaKnown RBP6.14□□□□□ -1.43
SCN1A-216ENST00000637968 RALYLQ86SE5 291 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms