RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 PPIP5K2O43314 1243 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 AKR1B1P15121 316 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 EZRP15311 586 aaKnown RBP21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 SLC29A2Q14542 456 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 C3orf20Q8ND61 904 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 NT5C3AQ9H0P0 336 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 L3MBTL1Q9Y468 752 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 BZW2Q9Y6E2 419 aaKnown RBP21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 VIMP08670 466 aaKnown RBP21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 KRT13P13646 458 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 GSTO1P78417 241 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 SEPT2Q15019 361 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 TEX2Q8IWB9 1127 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 LMBR1Q8WVP7 490 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 ZNF317Q96PQ6 595 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 PSTPIP2Q9H939 334 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 NOD2Q9HC29 1040 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 CD2APQ9Y5K6 639 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 C21orf2O43822 256 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 PPFIA2O75334 1257 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 ATP6V1G2O95670 118 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 LLGL1Q15334 1064 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 SLC10A5Q5PT55 438 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 DPP8Q6V1X1 898 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 REEP2Q9BRK0 252 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 DHX36Q9H2U1 1008 aaKnown RBP21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 ADAM7Q9H2U9 754 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 TAS2R14Q9NYV8 317 aa21.93■■□□□ 1.1
CACNA1A-243ENST00000637616 EVI5O60447 810 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 PMS2P54278 862 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 CYP4A11Q02928 519 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 KNOP1Q1ED39 458 aaKnown RBP21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 FOXR2Q6PJQ5 311 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 MIEF2Q96C03 454 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 ARHGEF26Q96DR7 871 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 KDM4CQ9H3R0 1056 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 SEMA4AQ9H3S1 761 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 MTMR4Q9NYA4 1195 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 DAAM1Q9Y4D1 1078 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 TULP1O00294 542 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 MGRN1O60291 552 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 TM4SF1P30408 202 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 CLNS1AP54105 237 aaKnown RBP21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 SLC12A3P55017 1021 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 EDRF1Q3B7T1 1238 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 VPS36Q86VN1 386 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 PALB2Q86YC2 1186 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 KSR1Q8IVT5 923 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 CUL5Q93034 780 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 C18orf8Q96DM3 657 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 SWAP70Q9UH65 585 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 IRS2Q9Y4H2 1338 aa21.92■■□□□ 1.1
CACNA1A-243ENST00000637616 HGSO14964 777 aaPredicted RBP21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 GIT2Q14161 759 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 CATSPER3Q86XQ3 398 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 EPS8L3Q8TE67 593 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 SEC14L1Q92503 715 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 STAMBPL1Q96FJ0 436 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 ZDHHC18Q9NUE0 388 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 DBR1Q9UK59 544 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 DOT1LQ8TEK3 1739 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 FGFR4P22455 802 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 PAX7P23759 505 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 SLC30A10Q6XR72 485 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 FRMD5Q7Z6J6 570 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 BANK1Q8NDB2 785 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 SLC35C1Q96A29 364 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 ERP44Q9BS26 406 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 ABCA3Q99758 1704 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 DDX3YO15523 660 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 POLD1P28340 1107 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 LRRC14Q15048 493 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 MGARPQ8TDB4 240 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 ATXN2LQ8WWM7 1075 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 ALG3Q92685 438 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 THOC1Q96FV9 657 aaKnown RBP21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 TXLNGYQ9BZA5 131 aa21.91■■□□□ 1.1
CACNA1A-243ENST00000637616 PNMA6FA0A0J9YX94 578 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 TMEM110-MUSTN1A8MSY1 372 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 FOXO6A8MYZ6 492 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 SKAP2O75563 359 aaPredicted RBP21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 NR3C1P04150 777 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 LDHCP07864 332 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 PRKCIP41743 596 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 DENND2CQ68D51 928 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 SYCE1Q8N0S2 351 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 ABCF3Q9NUQ8 709 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 AGAP1Q9UPQ3 857 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 GOLGB1Q14789 3259 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 RGS16O15492 202 aaPredicted RBP21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 SMARCA1P28370 1054 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 GBP2P32456 591 aaPredicted RBP21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 JAM2P57087 298 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 DUPD1Q68J44 220 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 CCDC63Q8NA47 563 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 CNOT10Q9H9A5 744 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 MLXIPLQ9NP71 852 aa21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 INTS9Q9NV88 658 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-243ENST00000637616 NENFQ9UMX5 172 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms