RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PCDHGC5Q9Y5F6 944 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 CCDC66A2RUB6 948 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 SFI1A8K8P3 1242 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
CLN8-212ENST00000637083 CES2O00748 559 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 CTNND1O60716 968 aaKnown RBP13.25□□□□□ -0.29
CLN8-212ENST00000637083 RFX1P22670 979 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 SNRPFP62306 86 aaKnown RBP13.25□□□□□ -0.29
CLN8-212ENST00000637083 CCNI2Q6ZMN8 369 aaPredicted RBP13.25□□□□□ -0.29
CLN8-212ENST00000637083 SYCP3Q8IZU3 236 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 ANKRD13CQ8N6S4 541 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 FAM71BQ8TC56 605 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 TAF4BQ92750 862 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 BORCS6Q96GS4 357 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 TLR10Q9BXR5 811 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 GLIS2Q9BZE0 524 aaPredicted RBP13.25□□□□□ -0.29
CLN8-212ENST00000637083 PDE11AQ9HCR9 933 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 KCNH7Q9NS40 1196 aa13.25□□□□□ -0.29
CLN8-212ENST00000637083 ZMYM2Q9UBW7 1377 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 ZBED4O75132 1171 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 ACTN1P12814 892 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 INPP5BP32019 993 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 CASP4P49662 377 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 PTK2Q05397 1052 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 C2orf54Q08AI8 447 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 CETN1Q12798 172 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 RASA3Q14644 834 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 CCDC43Q96MW1 224 aaKnown RBP13.24□□□□□ -0.29
CLN8-212ENST00000637083 IWS1Q96ST2 819 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 DMAC2Q9NW81 257 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 PSD3Q9NYI0 1048 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 PRDM4Q9UKN5 801 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
CLN8-212ENST00000637083 UBIAD1Q9Y5Z9 338 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 ZNF536O15090 1300 aa13.24□□□□□ -0.29
CLN8-212ENST00000637083 PHF20L1A8MW92 1017 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 PALMO75781 387 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 LYPLA2O95372 231 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 KRT13P13646 458 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 KLRC1P26715 233 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 TNNT3P45378 269 aaPredicted RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 FMO5P49326 533 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 JAM2P57087 298 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 MEI1Q5TIA1 1274 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 ALKBH5Q6P6C2 394 aaKnown RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 PADI6Q6TGC4 694 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 COG1Q8WTW3 980 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 TMEM174Q8WUU8 243 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 EXOC4Q96A65 974 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 FIZ1Q96SL8 496 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 TAOK3Q9H2K8 898 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 AGPAT3Q9NRZ7 376 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 SALL4Q9UJQ4 1053 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 A0A0A6YYK5 440 aaPredicted RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 N4BP1O75113 896 aaKnown RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 HIP1RO75146 1068 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 ALAS1P13196 640 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 ITGB5P18084 799 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 CYP2C19P33261 490 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 QARSP47897 775 aaKnown RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 TKFCQ3LXA3 575 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 ZNF571Q7Z3V5 609 aaPredicted RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 SYCE1Q8N0S2 351 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 BANK1Q8NDB2 785 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 CLEC4DQ8WXI8 215 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 STK33Q9BYT3 514 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 AGO4Q9HCK5 861 aaKnown RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 SIX2Q9NPC8 291 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
CLN8-212ENST00000637083 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
CLN8-212ENST00000637083 UTRNP46939 3433 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 P4HA2O15460 535 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 EXOC3O60645 756 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 H2AFZP0C0S5 128 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 LMNB1P20700 586 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 TNFRSF8P28908 595 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 SFNP31947 248 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 JAK3P52333 1124 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 ZNF280AP59817 542 aaPredicted RBP13.22□□□□□ -0.29
CLN8-212ENST00000637083 APBA1Q02410 837 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 KCNA1Q09470 495 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 MTMR1Q13613 665 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
CLN8-212ENST00000637083 TAF3Q5VWG9 929 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 DCAF15Q66K64 600 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 C8orf74Q6P047 294 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 H2AFVQ71UI9 128 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 GOLGA6L1Q8N7Z2 621 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 PBKQ96KB5 322 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 ACCSQ96QU6 501 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 SELENOOQ9BVL4 669 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 STRA6Q9BX79 667 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms