RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 USO1O60763 962 aaKnown RBP17.81■□□□□ 0.44
CLN6-216ENST00000636876 CLTBP09497 229 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 PLA2G4BP0C869 781 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 STAT6P42226 847 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
CLN6-216ENST00000636876 TRIM71Q2Q1W2 868 aaKnown RBP17.81■□□□□ 0.44
CLN6-216ENST00000636876 TPRNQ4KMQ1 711 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 NAALADL2Q58DX5 795 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 LINC01465Q8N7H1 131 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 RETREG2Q8NC44 543 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 SLC7A3Q8WY07 619 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 WNT8BQ93098 351 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 PDLIM7Q9NR12 457 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 TBX21Q9UL17 535 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 HPSEQ9Y251 543 aa17.81■□□□□ 0.44
CLN6-216ENST00000636876 POLR2DO15514 142 aaKnown RBP17.8■□□□□ 0.44
CLN6-216ENST00000636876 GAS2O43903 313 aaKnown RBP17.8■□□□□ 0.44
CLN6-216ENST00000636876 DGAT1O75907 488 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLN6-216ENST00000636876 CLCN3P51790 818 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 SLC12A3P55017 1021 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 MCM6Q14566 821 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 EMC2Q15006 297 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 E2F4Q16254 413 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 EFCAB12Q6NXP0 572 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 RPAINQ86UA6 219 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 C7orf61Q8IZ16 206 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 LRRC71Q8N4P6 559 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 METTL13Q8N6R0 699 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 SYT2Q8N9I0 419 aaPredicted RBP17.8■□□□□ 0.44
CLN6-216ENST00000636876 IQUBQ8NA54 791 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
CLN6-216ENST00000636876 DHX58Q96C10 678 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 PYM1Q9BRP8 204 aaKnown RBP17.8■□□□□ 0.44
CLN6-216ENST00000636876 FAM49AQ9H0Q0 323 aaPredicted RBP17.8■□□□□ 0.44
CLN6-216ENST00000636876 GOLPH3LQ9H4A5 285 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 ATP6V0A4Q9HBG4 840 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 XPNPEP1Q9NQW7 623 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 TMEM39AQ9NV64 488 aa17.8■□□□□ 0.44
CLN6-216ENST00000636876 EVI5O60447 810 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 GADD45BO75293 160 aaPredicted RBP17.79■□□□□ 0.44
CLN6-216ENST00000636876 RPLP2P05387 115 aaKnown RBP17.79■□□□□ 0.44
CLN6-216ENST00000636876 CYP11B2P19099 503 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 TMOD1P28289 359 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 NDUFA8P51970 172 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 RBL2Q08999 1139 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 SH3RF1Q7Z6J0 888 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 KIAA0319LQ8IZA0 1049 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 CCDC155Q8N6L0 562 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 CAGE1Q8TC20 777 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 DNAJB3Q8WWF6 145 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 DPF3Q92784 378 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 MTRQ99707 1265 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 NOC4LQ9BVI4 516 aaKnown RBP17.79■□□□□ 0.44
CLN6-216ENST00000636876 RUSC1Q9BVN2 902 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 CUEDC2Q9H467 287 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 SUGCTQ9HAC7 445 aa17.79■□□□□ 0.44
CLN6-216ENST00000636876 BMP2KQ9NSY1 1161 aaPredicted RBP17.79■□□□□ 0.44
CLN6-216ENST00000636876 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 CAND2O75155 1236 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 PRPF40AO75400 957 aaKnown RBP17.78■□□□□ 0.44
CLN6-216ENST00000636876 SYKP43405 635 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 DNM2P50570 870 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 MKRN4PQ13434 485 aaPredicted RBP17.78■□□□□ 0.44
CLN6-216ENST00000636876 DRP2Q13474 957 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 BFSP2Q13515 415 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 DHX8Q14562 1220 aaKnown RBP17.78■□□□□ 0.44
CLN6-216ENST00000636876 RINT1Q6NUQ1 792 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 C1orf186Q6ZWK4 172 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 RSPH3Q86UC2 560 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 GPBP1Q86WP2 473 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 NME8Q8N427 588 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 MCPH1Q8NEM0 835 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 MAP7D2Q96T17 732 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 HIPK3Q9H422 1215 aa17.78■□□□□ 0.44
CLN6-216ENST00000636876 PRDM5Q9NQX1 630 aaPredicted RBP17.78■□□□□ 0.44
CLN6-216ENST00000636876 TRIM43BA6NCK2 446 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 PITPNM1O00562 1244 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 CKBP12277 381 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 THPOP40225 353 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 FXR1P51114 621 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLN6-216ENST00000636876 UBE2HP62256 183 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 IER5Q5VY09 327 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 SV2BQ7L1I2 683 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 TCP11Q8WWU5 503 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 TMEM143Q96AN5 459 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 TRIM43Q96BQ3 446 aaPredicted RBP17.77■□□□□ 0.44
CLN6-216ENST00000636876 MAGEF1Q9HAY2 307 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 KCND2Q9NZV8 630 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 SUCLA2Q9P2R7 463 aaPredicted RBP17.77■□□□□ 0.44
CLN6-216ENST00000636876 USP25Q9UHP3 1055 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 AKT3Q9Y243 479 aa17.77■□□□□ 0.44
CLN6-216ENST00000636876 ACTN4O43707 911 aaKnown RBP17.76■□□□□ 0.43
CLN6-216ENST00000636876 VTNP04004 478 aa17.76■□□□□ 0.43
CLN6-216ENST00000636876 SLFN14P0C7P3 912 aa17.76■□□□□ 0.43
CLN6-216ENST00000636876 GUCY2CP25092 1073 aa17.76■□□□□ 0.43
CLN6-216ENST00000636876 ARSHQ5FYA8 562 aa17.76■□□□□ 0.43
CLN6-216ENST00000636876 PSPC1Q8WXF1 523 aaKnown RBP17.76■□□□□ 0.43
CLN6-216ENST00000636876 TIPINQ9BVW5 301 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms