RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 BRMS1Q9HCU9 246 aa16.9■□□□□ 0.3
CACNA1A-230ENST00000636768 SEPT9Q9UHD8 586 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-230ENST00000636768 ST3GAL5Q9UNP4 418 aa16.9■□□□□ 0.3
CACNA1A-230ENST00000636768 TTC28Q96AY4 2481 aa16.9■□□□□ 0.3
CACNA1A-230ENST00000636768 MARCH6O60337 910 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 CCNT1O60563 726 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 GPR32O75388 356 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 LARGE1O95461 756 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 RB1P06400 928 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 SARSP49591 514 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 XKR3Q5GH77 459 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 FAM43BQ6ZT52 329 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 NAP1L4Q99733 375 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 ADAM2Q99965 735 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 C1orf112Q9NSG2 853 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 PCDHB7Q9Y5E2 793 aa16.89■□□□□ 0.29
CACNA1A-230ENST00000636768 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 MGEA5O60502 916 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 BMP1P13497 986 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 KRT2P35908 639 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 NLRP11P59045 1033 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 MTERF2Q49AM1 385 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 ZNF710Q8N1W2 664 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 LINC01465Q8N7H1 131 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 CLP1Q92989 425 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 FAM20AQ96MK3 541 aa16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 UBE2ZQ9H832 354 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 MRPL42Q9Y6G3 142 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 SPTBN5Q9NRC6 3674 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-230ENST00000636768 SEC24BO95487 1268 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 LINC00271P0C7V0 271 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 FDPSP14324 419 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 GATMP50440 423 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 FOSBP53539 338 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 PPP4R3AQ6IN85 833 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 SLC24A5Q71RS6 500 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 CRIPAKQ8N1N5 446 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 ZNF668Q96K58 619 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 PLVAPQ9BX97 442 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 KCNMB3Q9NPA1 279 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 RGS18Q9NS28 235 aa16.87■□□□□ 0.29
CACNA1A-230ENST00000636768 TMEM150BA6NC51 233 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 DDX11L8A8MPP1 907 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 GRM6O15303 877 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 CSPG5O95196 566 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 PSMC5P62195 406 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 NR5A1Q13285 461 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 PPP2R5CQ13362 524 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 TRIM29Q14134 588 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 TARBP2Q15633 366 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 TCEAL5Q5H9L2 206 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 NSUN7Q8NE18 718 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 NLRP7Q8WX94 980 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 NECAB3Q96P71 396 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 SH2D3AQ9BRG2 576 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 NIFKQ9BYG3 293 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 LMAN2LQ9H0V9 348 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 ADAMTS10Q9H324 1103 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 NSUN3Q9H649 340 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 VAV3Q9UKW4 847 aa16.86■□□□□ 0.29
CACNA1A-230ENST00000636768 C9IYK1 514 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 EML1O00423 815 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 TBX3O15119 743 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 JAK2O60674 1132 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 KCNA5P22460 613 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 EIF4BP23588 611 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 DNM2P50570 870 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 GPC3P51654 580 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 EARS2Q5JPH6 523 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 SPOUT1Q5T280 376 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 EP400NLQ6ZTU2 488 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 ATP6V0A4Q9HBG4 840 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 XIRP2A4UGR9 3374 aa16.85■□□□□ 0.29
CACNA1A-230ENST00000636768 FAM205CA6NFA0 338 aa16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 TBKBP1A7MCY6 615 aa16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 DKC1O60832 514 aaKnown RBP eCLIP16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 BAG4O95429 457 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 DARSP14868 501 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 ALG13Q9NP73 1137 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 TMEM161AQ9NX61 479 aa16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 REV3LO60673 3130 aa16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 TTC3P53804 2025 aa16.84■□□□□ 0.29
CACNA1A-230ENST00000636768 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-230ENST00000636768 STBD1O95210 358 aa16.83■□□□□ 0.28
CACNA1A-230ENST00000636768 MMP1P03956 469 aa16.83■□□□□ 0.28
CACNA1A-230ENST00000636768 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-230ENST00000636768 CDC42EP1Q00587 391 aa16.83■□□□□ 0.28
CACNA1A-230ENST00000636768 DRP2Q13474 957 aa16.83■□□□□ 0.28
CACNA1A-230ENST00000636768 DSC3Q14574 896 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms