RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 SIP14410 1827 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 HIP1RO75146 1068 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 KRT18P05783 430 aaKnown RBP11.84□□□□□ -0.51
CLN5-213ENST00000636681 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
CLN5-213ENST00000636681 CLCN3P51790 818 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 ACLYP53396 1101 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 NKX3-2P78367 333 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 PPFIA1Q13136 1202 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 GRIK4Q16099 956 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 KSR1Q8IVT5 923 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 SPATA20Q8TB22 786 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
CLN5-213ENST00000636681 LMBR1Q8WVP7 490 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 CCDC43Q96MW1 224 aaKnown RBP11.84□□□□□ -0.51
CLN5-213ENST00000636681 FUCA2Q9BTY2 467 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 SPC25Q9HBM1 224 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 MAPK8IP1Q9UQF2 711 aa11.84□□□□□ -0.51
CLN5-213ENST00000636681 HBP1O60381 514 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 C22orf31O95567 290 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
CLN5-213ENST00000636681 KLRC1P26715 233 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 CASP5P51878 434 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 STK4Q13043 487 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 COASYQ13057 564 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 EMC2Q15006 297 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 KANK3Q6NY19 840 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 RUFY4Q6ZNE9 571 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
CLN5-213ENST00000636681 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 GAS2L3Q86XJ1 694 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 SMARCE1Q969G3 411 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 ARMC5Q96C12 935 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 PYM1Q9BRP8 204 aaKnown RBP11.83□□□□□ -0.52
CLN5-213ENST00000636681 MTG1Q9BT17 334 aaPredicted RBP11.83□□□□□ -0.52
CLN5-213ENST00000636681 KIFC3Q9BVG8 833 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 DHX33Q9H6R0 707 aaKnown RBP11.83□□□□□ -0.52
CLN5-213ENST00000636681 SUGCTQ9HAC7 445 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 SLC39A2Q9NP94 309 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 PANK4Q9NVE7 773 aa11.83□□□□□ -0.52
CLN5-213ENST00000636681 TREHO43280 583 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 MAFO75444 373 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 XRCC6P12956 609 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLN5-213ENST00000636681 CST5P28325 142 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 NMT1P30419 496 aaKnown RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 POLGP54098 1239 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 MORC3Q14149 939 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 DPCR1Q3MIW9 517 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 RNF180Q86T96 592 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 WNT8BQ93098 351 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 SYAP1Q96A49 352 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 MAGEF1Q9HAY2 307 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 ZNF215Q9UL58 517 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 USP20Q9Y2K6 914 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 A0A1W2PQ45 241 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 A0A1W2PQY0 241 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 DKC1O60832 514 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLN5-213ENST00000636681 TYRO3Q06418 890 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 EHHADHQ08426 723 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 TBC1D8BQ0IIM8 1120 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 TMEM62Q0P6H9 643 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 FAM47CQ5HY64 1035 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 NT5DC1Q5TFE4 455 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 GDF6Q6KF10 455 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 ELOA2Q8IYF1 753 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 METTL13Q8N6R0 699 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 U2AF1L4Q8WU68 220 aaKnown RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 VTI1AQ96AJ9 217 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 FAM167AQ96KS9 214 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 CTAGE1Q96RT6 745 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 FIZ1Q96SL8 496 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
CLN5-213ENST00000636681 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
CLN5-213ENST00000636681 ADGRA3Q8IWK6 1321 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 FRMD3A2A2Y4 597 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 MSCO60682 206 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 VTNP04004 478 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 MYBP10242 640 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 GUCY2CP25092 1073 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 SLC26A2P50443 739 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 ADAM17P78536 824 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 AMPD3Q01432 767 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 KCNA1Q09470 495 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 ZC2HC1CQ53FD0 456 aaPredicted RBP11.81□□□□□ -0.52
CLN5-213ENST00000636681 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
CLN5-213ENST00000636681 EFCAB12Q6NXP0 572 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 MTHFD1LQ6UB35 978 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 UNC13DQ70J99 1090 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 MYCT1Q8N699 235 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 FAM49AQ9H0Q0 323 aaPredicted RBP11.81□□□□□ -0.52
CLN5-213ENST00000636681 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 ATP6V0A4Q9HBG4 840 aa11.81□□□□□ -0.52
CLN5-213ENST00000636681 OGDHLQ9ULD0 1010 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms