RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 ATMINO43313 823 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 ABCB5Q2M3G0 1257 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 NBPF9Q3BBW0 867 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 GLE1Q53GS7 698 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 RINT1Q6NUQ1 792 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 DPY19L2P1Q6NXN4 242 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 ZSWIM2Q8NEG5 633 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 LNX1Q8TBB1 728 aaPredicted RBP15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 SLC35G2Q8TBE7 412 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 ARHGEF26Q96DR7 871 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 ATP6V1G3Q96LB4 118 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 WNK3Q9BYP7 1800 aa15.28■□□□□ 0.04
CACNA1A-228ENST00000636610 TMEM150BA6NC51 233 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 EDRF1Q3B7T1 1238 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 PPP1R18Q6NYC8 613 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 CPNE8Q86YQ8 564 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 SYCP3Q8IZU3 236 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 OTUD6BQ8N6M0 293 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 LRRC57Q8N9N7 239 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 WRAP73Q9P2S5 460 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 MAST2Q6P0Q8 1798 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 GCOM1H8Y6P7 765 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 OPLAHO14841 1288 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 MYZAPP0CAP1 466 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 KRT13P13646 458 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 ECHS1P30084 290 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 STAT1P42224 750 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 HYIQ5T013 277 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 UBAP2Q5T6F2 1119 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 EFCAB13Q8IY85 973 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 ACER1Q8TDN7 264 aa15.27■□□□□ 0.04
CACNA1A-228ENST00000636610 MYH4Q9Y623 1939 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 KIAA0754O94854 1291 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 KRT71Q3SY84 523 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 ODR4Q5SWX8 454 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 SYDE2Q5VT97 1194 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 FRMD5Q7Z6J6 570 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 PHLDB2Q86SQ0 1253 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 VPS36Q86VN1 386 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 SLC20A1Q8WUM9 679 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 CCT8L2Q96SF2 557 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 WDR18Q9BV38 432 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 THAP2Q9H0W7 228 aa15.27■□□□□ 0.03
CACNA1A-228ENST00000636610 A0A087WUV0 522 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 IFFO1Q0D2I5 559 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 TYW1Q9NV66 732 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 PPP1R37O75864 691 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 CALCAP01258 141 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 MARCKSL1P49006 195 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 NT5C2P49902 561 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 DLG4P78352 724 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 KIAA1755Q5JYT7 1200 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 SP8Q8IXZ3 490 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 ERVK-5Q9HDB9 667 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 PI4KBQ9UBF8 816 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 TRAF3IP3Q9Y228 551 aa15.26■□□□□ 0.03
CACNA1A-228ENST00000636610 PDXKO00764 312 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 EXOC3O60645 756 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 RPL13P26373 211 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 SLCO1A2P46721 670 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 PLTPP55058 493 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 MAGOHP61326 146 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 ZNF844Q08AG5 666 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 FAM178BQ8IXR5 827 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 ZNF473Q8WTR7 871 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 MAGOHBQ96A72 148 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 BTBD6Q96KE9 485 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 FBXO28Q9NVF7 368 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 RNF14Q9UBS8 474 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 SNX24Q9Y343 169 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 BTAF1O14981 1849 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 ADAMTSL1Q8N6G6 1762 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 NRAPQ86VF7 1730 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 FRMD3A2A2Y4 597 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 SLITRK3O94933 977 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 BMP3P12645 472 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 MDH1P40925 334 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 MARSP56192 900 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 CDAN1Q8IWY9 1227 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 KAT5Q92993 513 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 CSRNP1Q96S65 589 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 TMX4Q9H1E5 349 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 ISCUQ9H1K1 167 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 CNOT8Q9UFF9 292 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 AMFRQ9UKV5 643 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 VAV3Q9UKW4 847 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 PTPN22Q9Y2R2 807 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 GOLGA8IPA6NC78 632 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 GOLGA8JA6NMD2 632 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms