RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 PCDHB7Q9Y5E2 793 aa21.33■■□□□ 1.01
CLN6-213ENST00000636212 A0A0C4DFX4 3053 aa21.33■■□□□ 1
CLN6-213ENST00000636212 RALGAPA2Q2PPJ7 1873 aa21.32■■□□□ 1
CLN6-213ENST00000636212 PRRC2BQ5JSZ5 2229 aaKnown RBP21.32■■□□□ 1
CLN6-213ENST00000636212 PRUNE2Q8WUY3 3088 aa21.32■■□□□ 1
CLN6-213ENST00000636212 C5orf67F2Z3F1 127 aa21.32■■□□□ 1
CLN6-213ENST00000636212 TNFRSF10AO00220 468 aa21.32■■□□□ 1
CLN6-213ENST00000636212 BAG4O95429 457 aaKnown RBP21.32■■□□□ 1
CLN6-213ENST00000636212 CTDNEP1O95476 244 aa21.32■■□□□ 1
CLN6-213ENST00000636212 SARSP49591 514 aaKnown RBP21.32■■□□□ 1
CLN6-213ENST00000636212 DNM2P50570 870 aa21.32■■□□□ 1
CLN6-213ENST00000636212 NLRP11P59045 1033 aaKnown RBP21.32■■□□□ 1
CLN6-213ENST00000636212 CDC42EP1Q00587 391 aa21.32■■□□□ 1
CLN6-213ENST00000636212 UGCGQ16739 394 aa21.32■■□□□ 1
CLN6-213ENST00000636212 ME3Q16798 604 aa21.32■■□□□ 1
CLN6-213ENST00000636212 LRRC71Q8N4P6 559 aa21.32■■□□□ 1
CLN6-213ENST00000636212 UHRF1Q96T88 793 aaPredicted RBP21.32■■□□□ 1
CLN6-213ENST00000636212 ADAM2Q99965 735 aa21.32■■□□□ 1
CLN6-213ENST00000636212 LMAN2LQ9H0V9 348 aa21.32■■□□□ 1
CLN6-213ENST00000636212 NLRC5Q86WI3 1866 aa21.31■■□□□ 1
CLN6-213ENST00000636212 SLC37A4O43826 429 aa21.31■■□□□ 1
CLN6-213ENST00000636212 GPR32O75388 356 aa21.31■■□□□ 1
CLN6-213ENST00000636212 PSMC5P62195 406 aa21.31■■□□□ 1
CLN6-213ENST00000636212 MTERF2Q49AM1 385 aa21.31■■□□□ 1
CLN6-213ENST00000636212 SLC24A5Q71RS6 500 aa21.31■■□□□ 1
CLN6-213ENST00000636212 BANK1Q8NDB2 785 aa21.31■■□□□ 1
CLN6-213ENST00000636212 CLP1Q92989 425 aaKnown RBP21.31■■□□□ 1
CLN6-213ENST00000636212 JPH2Q9BR39 696 aaPredicted RBP21.31■■□□□ 1
CLN6-213ENST00000636212 PLVAPQ9BX97 442 aa21.31■■□□□ 1
CLN6-213ENST00000636212 TMX1Q9H3N1 280 aa21.31■■□□□ 1
CLN6-213ENST00000636212 RC3H2Q9HBD1 1191 aaKnown RBP21.31■■□□□ 1
CLN6-213ENST00000636212 RGS18Q9NS28 235 aa21.31■■□□□ 1
CLN6-213ENST00000636212 LOXHD1Q8IVV2 1947 aa21.3■■□□□ 1
CLN6-213ENST00000636212 TTC3P53804 2025 aa21.3■■□□□ 1
CLN6-213ENST00000636212 DDX11L8A8MPP1 907 aa21.3■■□□□ 1
CLN6-213ENST00000636212 TBX3O15119 743 aa21.3■■□□□ 1
CLN6-213ENST00000636212 ZSCAN20P17040 1043 aaPredicted RBP21.3■■□□□ 1
CLN6-213ENST00000636212 PAN2Q504Q3 1202 aaKnown RBP21.3■■□□□ 1
CLN6-213ENST00000636212 TMEM40Q8WWA1 233 aa21.3■■□□□ 1
CLN6-213ENST00000636212 NIFKQ9BYG3 293 aaKnown RBP21.3■■□□□ 1
CLN6-213ENST00000636212 GJB4Q9NTQ9 266 aa21.3■■□□□ 1
CLN6-213ENST00000636212 EVPLQ92817 2033 aa21.29■■□□□ 1
CLN6-213ENST00000636212 TRANK1O15050 2925 aa21.29■■□□□ 1
CLN6-213ENST00000636212 BMP1P13497 986 aa21.29■■□□□ 1
CLN6-213ENST00000636212 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
CLN6-213ENST00000636212 KCNQ1P51787 676 aa21.29■■□□□ 1
CLN6-213ENST00000636212 PPP2R5CQ13362 524 aa21.29■■□□□ 1
CLN6-213ENST00000636212 NAALADL2Q58DX5 795 aa21.29■■□□□ 1
CLN6-213ENST00000636212 B3GNT9Q6UX72 402 aa21.29■■□□□ 1
CLN6-213ENST00000636212 FAM228AQ86W67 206 aa21.29■■□□□ 1
CLN6-213ENST00000636212 EXOC8Q8IYI6 725 aa21.29■■□□□ 1
CLN6-213ENST00000636212 SLFN12Q8IYM2 578 aa21.29■■□□□ 1
CLN6-213ENST00000636212 NSUN7Q8NE18 718 aaKnown RBP21.29■■□□□ 1
CLN6-213ENST00000636212 OXER1Q8TDS5 423 aa21.29■■□□□ 1
CLN6-213ENST00000636212 NLRP7Q8WX94 980 aa21.29■■□□□ 1
CLN6-213ENST00000636212 NSUN3Q9H649 340 aaKnown RBP21.29■■□□□ 1
CLN6-213ENST00000636212 UBE2ZQ9H832 354 aaPredicted RBP21.29■■□□□ 1
CLN6-213ENST00000636212 CUL9Q8IWT3 2517 aa21.28■■□□□ 1
CLN6-213ENST00000636212 LARGE1O95461 756 aa21.28■■□□□ 1
CLN6-213ENST00000636212 QARSP47897 775 aaKnown RBP21.28■■□□□ 1
CLN6-213ENST00000636212 TARBP2Q15633 366 aaKnown RBP21.28■■□□□ 1
CLN6-213ENST00000636212 SPOUT1Q5T280 376 aaKnown RBP21.28■■□□□ 1
CLN6-213ENST00000636212 LINC01465Q8N7H1 131 aa21.28■■□□□ 1
CLN6-213ENST00000636212 P2RX5Q93086 422 aa21.28■■□□□ 1
CLN6-213ENST00000636212 ATP6V0A4Q9HBG4 840 aa21.28■■□□□ 1
CLN6-213ENST00000636212 KCNMB3Q9NPA1 279 aa21.28■■□□□ 1
CLN6-213ENST00000636212 AAASQ9NRG9 546 aa21.28■■□□□ 1
CLN6-213ENST00000636212 MRPL42Q9Y6G3 142 aaKnown RBP21.28■■□□□ 1
CLN6-213ENST00000636212 WDR81Q562E7 1941 aa21.27■■□□□ 1
CLN6-213ENST00000636212 MGEA5O60502 916 aa21.27■■□□□ 1
CLN6-213ENST00000636212 DTNBO60941 627 aa21.27■■□□□ 1
CLN6-213ENST00000636212 P4HBP07237 508 aaKnown RBP21.27■■□□□ 1
CLN6-213ENST00000636212 FDPSP14324 419 aaKnown RBP21.27■■□□□ 1
CLN6-213ENST00000636212 GPC3P51654 580 aa21.27■■□□□ 1
CLN6-213ENST00000636212 CRIPAKQ8N1N5 446 aa21.27■■□□□ 1
CLN6-213ENST00000636212 GCOM2Q9BZD3 368 aaPredicted RBP21.27■■□□□ 1
CLN6-213ENST00000636212 ADAMTS10Q9H324 1103 aa21.27■■□□□ 1
CLN6-213ENST00000636212 TMEM161AQ9NX61 479 aa21.27■■□□□ 1
CLN6-213ENST00000636212 LIMCH1Q9UPQ0 1083 aa21.27■■□□□ 1
CLN6-213ENST00000636212 C9IYK1 514 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 HOXA2O43364 376 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 NCK2O43639 380 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 SEC24BO95487 1268 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 MMP1P03956 469 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 NR5A1Q13285 461 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 SAFBQ15424 915 aaKnown RBP eCLIP21.26■□□□□ 0.99
CLN6-213ENST00000636212 EP400NLQ6ZTU2 488 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 POTEDQ86YR6 584 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 PPP2R3CQ969Q6 453 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 INO80BQ9C086 356 aaPredicted RBP21.26■□□□□ 0.99
CLN6-213ENST00000636212 ELAC1Q9H777 363 aaKnown RBP21.26■□□□□ 0.99
CLN6-213ENST00000636212 VAV3Q9UKW4 847 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 PPME1Q9Y570 386 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 PCDHB12Q9Y5F1 795 aa21.26■□□□□ 0.99
CLN6-213ENST00000636212 TBKBP1A7MCY6 615 aa21.25■□□□□ 0.99
CLN6-213ENST00000636212 DARSP14868 501 aaKnown RBP21.25■□□□□ 0.99
CLN6-213ENST00000636212 EPHA7Q15375 998 aa21.25■□□□□ 0.99
CLN6-213ENST00000636212 TCEAL5Q5H9L2 206 aa21.25■□□□□ 0.99
CLN6-213ENST00000636212 NCAPH2Q6IBW4 605 aa21.25■□□□□ 0.99
CLN6-213ENST00000636212 OTUD6AQ7L8S5 288 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms