RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PAGR1Q9BTK6 254 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 SUGCTQ9HAC7 445 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 KRT84Q9NSB2 600 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 INTS9Q9NV88 658 aaKnown RBP6.41□□□□□ -1.38
SCN1A-212ENST00000636194 DTNAQ9Y4J8 743 aa6.41□□□□□ -1.38
SCN1A-212ENST00000636194 H7C1W4 665 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 MFN2O95140 757 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 RASA1P20936 1047 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 BCAP31P51572 246 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 MFAP3P55082 362 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 GABPB1Q06547 395 aaPredicted RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ITGADQ13349 1161 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 RWDD4Q6NW29 188 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 NLRP14Q86W24 1093 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ASAP1Q9ULH1 1129 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 EIF2AK4Q9P2K8 1649 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 SMIM31A0A1B0GVY4 71 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 DYTNA2CJ06 578 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 TIPRLO75663 272 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 HSD3B1P14060 373 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 HADHAP40939 763 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 NR1H3Q13133 447 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 RASGRF1Q13972 1273 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ESPL1Q14674 2120 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ZKSCAN8Q15776 578 aaPredicted RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 RBBP7Q16576 425 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 EIF2S3LQ2VIR3 472 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CDCA7LQ96GN5 454 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CRELD1Q96HD1 420 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 NARS2Q96I59 477 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 COQ7Q99807 217 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 LBHD1Q9BQE6 289 aaPredicted RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CTNNAL1Q9UBT7 734 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ADAM30Q9UKF2 790 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 POTECB2RU33 542 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 HNRNPDLO14979 420 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 KRT37O76014 449 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 UFL1O94874 794 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ATP1A1P05023 1023 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 MLNP12872 115 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 UBA1P22314 1058 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CAMK1Q14012 370 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 DLGAP5Q15398 846 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ULK3Q6PHR2 472 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 DARS2Q6PI48 645 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 SYT10Q6XYQ8 523 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 EGFL8Q99944 293 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 DNAJC25Q9H1X3 360 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 PLEKHA5Q9HAU0 1116 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 NEK6Q9HC98 313 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ZBTB1Q9Y2K1 713 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 COL4A3BPQ9Y5P4 624 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 RNF103-CHMP3A0A140T963 221 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ECEL1O95672 775 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CYP2C19P33261 490 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 KRT20P35900 424 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CYP2J2P51589 502 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 SESN2P58004 480 aaPredicted RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ARF3P61204 181 aaPredicted RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ARF1P84077 181 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ARF5P84085 180 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 VEPH1Q14D04 833 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 FAM45AQ8TCE6 357 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 FAM149B1Q96BN6 582 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 ZBTB9Q96C00 473 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 SAAL1Q96ER3 474 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 CASS4Q9NQ75 786 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 DACT1Q9NYF0 836 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 FBXL5Q9UKA1 691 aa6.4□□□□□ -1.38
SCN1A-212ENST00000636194 APOBEC2Q9Y235 224 aaKnown RBP6.4□□□□□ -1.38
SCN1A-212ENST00000636194 EIF4E1BA6NMX2 242 aaKnown RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 POC1B-GALNT4F8VUJ3 575 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 WWP2O00308 870 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 RIMBP2O15034 1052 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 ADCY3O60266 1144 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 HSPA4LO95757 839 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 MAGEA1P43355 309 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 POLE2P56282 527 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 CAV3P56539 151 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 GALNT17Q6IS24 598 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 DHX32Q7L7V1 743 aaKnown RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 SKAP1Q86WV1 359 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 WDR75Q8IWA0 830 aaKnown RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 GIMAP8Q8ND71 665 aaPredicted RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 NUDT16Q96DE0 195 aaKnown RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 FKBP14Q9NWM8 211 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 EHD2Q9NZN4 543 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 A0A087WUV0 522 aaPredicted RBP6.4□□□□□ -1.39
SCN1A-212ENST00000636194 CHUKO15111 745 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 CFLARO15519 480 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 BNIP3LO60238 219 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 ABCB4P21439 1286 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 ACADLP28330 430 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 COPS2P61201 443 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 SF3A3Q12874 501 aaKnown RBP eCLIP6.4□□□□□ -1.392e-17■■■■■ 37.8
SCN1A-212ENST00000636194 SYTL3Q4VX76 610 aa6.4□□□□□ -1.39
SCN1A-212ENST00000636194 NAALADL2Q58DX5 795 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms