RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 MCM10Q7L590 875 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 RCBTB1Q8NDN9 531 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 FBXW5Q969U6 566 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 UTP4Q969X6 686 aaKnown RBP8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 TCTN2Q96GX1 697 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 SCYL1Q96KG9 808 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 VTA1Q9NP79 307 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 GPATCH2Q9NW75 528 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 GTF2IRD1Q9UHL9 959 aa8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 PNMA8BQ9ULN7 279 aaPredicted RBP8.64□□□□□ -1.03
SMARCA2-244ENST00000635659 TIAM2Q8IVF5 1701 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 CARMIL3Q8ND23 1372 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 TNRC6CQ9HCJ0 1690 aaKnown RBP8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 MYBBP1AQ9BQG0 1328 aaKnown RBP8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 PTPDC1A2A3K4 754 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 CT47B1P0C2W7 299 aaPredicted RBP8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 FAM87AP0C7U9 286 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 NOS3P29474 1203 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 RFC4P35249 363 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 GPR162Q16538 588 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 ARHGAP44Q17R89 818 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 SYCP2LQ5T4T6 812 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 CREB3L3Q68CJ9 461 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 SLC4A10Q6U841 1118 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 MFSD4AQ8N468 514 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 SVOPQ8N4V2 548 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 EFHBQ8N7U6 833 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 CLRN3Q8NCR9 226 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 CAPN6Q9Y6Q1 641 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 FER1L6Q2WGJ9 1857 aa8.63□□□□□ -1.03
SMARCA2-244ENST00000635659 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 C9orf172C9J069 976 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 FAM47E-STBD1D6RA91 191 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 POLRMTO00411 1230 aaKnown RBP8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 IGF2BP3O00425 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 MT-CO1P00395 513 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 SPATA31C1P0DKV0 1188 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 PAMP19021 973 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 CCND1P24385 295 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 GMPRP36959 345 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 DNM2P50570 870 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 EIF5P55010 431 aaKnown RBP8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 ST5P78524 1137 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 DDX10Q13206 875 aaKnown RBP8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 TCIRG1Q13488 830 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 BRD3Q15059 726 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 RALBP1Q15311 655 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 KSR2Q6VAB6 950 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 C16orf59Q7L2K0 433 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 OTOP1Q7RTM1 612 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 FAM20CQ8IXL6 584 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 TTC5Q8N0Z6 440 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 WFDC12Q8WWY7 111 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 SLC5A5Q92911 643 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 MPHOSPH6Q99547 160 aaKnown RBP8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 IPPKQ9H8X2 491 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 CHST12Q9NRB3 414 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 OBP2AQ9NY56 170 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 ANKRD6Q9Y2G4 727 aa8.62□□□□□ -1.03
SMARCA2-244ENST00000635659 PRAMEF22A3QJZ6 481 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 PRR33A8MZF0 331 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 HTATSF1O43719 755 aaKnown RBP8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 GRK2P25098 689 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 GRK3P35626 688 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 GRIK1P39086 918 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 RECQLP46063 649 aaPredicted RBP8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 NFKBIBQ15653 356 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 RTP2Q5QGT7 225 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 ARMC10Q8N2F6 343 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 CPA6Q8N4T0 437 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 C2orf69Q8N8R5 385 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 FMNL2Q96PY5 1086 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 NACC1Q96RE7 527 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 OXSMQ9NWU1 459 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 NARFQ9UHQ1 456 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 GIT1Q9Y2X7 761 aa8.61□□□□□ -1.03
SMARCA2-244ENST00000635659 CEP350Q5VT06 3117 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 NPHP3-ACAD11A0A0J9YXS1 232 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 VSTM5A8MXK1 200 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 MYO1BO43795 1136 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 ARHGEF15O94989 841 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 CFBP00751 764 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 GSTM1P09488 218 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 RBP3P10745 1247 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 TM4SF1P30408 202 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 IREB2P48200 963 aaKnown RBP8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 PURAQ00577 322 aaKnown RBP8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 INF2Q27J81 1249 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 MINDY4Q4G0A6 757 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 TPH2Q8IWU9 490 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 CISD2Q8N5K1 135 aaKnown RBP8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 HEXIM2Q96MH2 286 aaKnown RBP8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 TRIT1Q9H3H1 467 aaKnown RBP8.6□□□□□ -1.03
SMARCA2-244ENST00000635659 PCDHA2Q9Y5H9 948 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms