RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 FAM178BQ8IXR5 827 aa14.28□□□□□ -0.12
RAB5B-211ENST00000628569 CCDC43Q96MW1 224 aaKnown RBP14.28□□□□□ -0.12
RAB5B-211ENST00000628569 NOC4LQ9BVI4 516 aaKnown RBP14.28□□□□□ -0.12
RAB5B-211ENST00000628569 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
RAB5B-211ENST00000628569 TELO2Q9Y4R8 837 aa14.28□□□□□ -0.12
RAB5B-211ENST00000628569 PPME1Q9Y570 386 aa14.28□□□□□ -0.12
RAB5B-211ENST00000628569 SIP14410 1827 aa14.27□□□□□ -0.12
RAB5B-211ENST00000628569 RBM47A0AV96 593 aaKnown RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 AKR1B15C9JRZ8 316 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 CETN3O15182 167 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 TGFB1I1O43294 461 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 STX10O60499 249 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 USO1O60763 962 aaKnown RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 MFAP3LO75121 409 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 DGAT1O75907 488 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 PRKCSHP14314 528 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 SNRPFP62306 86 aaKnown RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 GTF2BQ00403 316 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 PRKCEQ02156 737 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 PPP2R3AQ06190 1150 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 RBL2Q08999 1139 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 MYBPC2Q14324 1141 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 GRB14Q14449 540 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 PTPN21Q16825 1174 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 MAMDC4Q6UXC1 1216 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 FRMD5Q7Z6J6 570 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 SAPCD2Q86UD0 394 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 PPFIBP1Q86W92 1011 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 ANKRD13CQ8N6S4 541 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 RETREG2Q8NC44 543 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 MCPH1Q8NEM0 835 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 GOLGA5Q8TBA6 731 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 SPIRE2Q8WWL2 714 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 KIFAP3Q92845 792 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 HVCN1Q96D96 273 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 NTPCRQ9BSD7 190 aaKnown RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 NUP58Q9BVL2 599 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 NIFKQ9BYG3 293 aaKnown RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 TTYH3Q9C0H2 523 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 NDST4Q9H3R1 872 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 ZNF302Q9NR11 478 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.13
RAB5B-211ENST00000628569 MCM3APO60318 1980 aa14.27□□□□□ -0.13
RAB5B-211ENST00000628569 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
RAB5B-211ENST00000628569 ARHGAP6O43182 974 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 LGR5O75473 907 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 ARIH2O95376 493 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 OATP04181 439 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 SLC10A3P09131 477 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 ATP4AP20648 1035 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 NR2F2P24468 414 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 RPL13P26373 211 aaKnown RBP14.26□□□□□ -0.13
RAB5B-211ENST00000628569 ADORA2AP29274 412 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 MAPK4P31152 587 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 NPEPPSP55786 919 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 INHBEP58166 350 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
RAB5B-211ENST00000628569 ADAM9Q13443 819 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 CELF3Q5SZQ8 465 aaKnown RBP14.26□□□□□ -0.13
RAB5B-211ENST00000628569 FKBP15Q5T1M5 1219 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 UTP14CQ5TAP6 766 aaKnown RBP14.26□□□□□ -0.13
RAB5B-211ENST00000628569 CEP135Q66GS9 1140 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 PLA2G4FQ68DD2 849 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 SLC9A9Q8IVB4 645 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 C12orf56Q8IXR9 622 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 CEP89Q96ST8 783 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 PCYT2Q99447 389 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 MKNK1Q9BUB5 465 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 NAA15Q9BXJ9 866 aaKnown RBP14.26□□□□□ -0.13
RAB5B-211ENST00000628569 VTA1Q9NP79 307 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 CYP26B1Q9NR63 512 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 DMAC2Q9NW81 257 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
RAB5B-211ENST00000628569 EMSYQ7Z589 1322 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 A0A1W2PQJ5 194 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 TMEM150BA6NC51 233 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 GGPS1O95749 300 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 NR3C1P04150 777 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 TPM1P09493 284 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 SCP2P22307 547 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 CASP14P31944 242 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 ABCD1P33897 745 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 MCCD1P59942 119 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-211ENST00000628569 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 IRF5Q13568 498 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 ZC2HC1CQ53FD0 456 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-211ENST00000628569 WDR78Q5VTH9 848 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 FAM160B1Q5W0V3 765 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 ARMCX2Q7L311 632 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 SCFD2Q8WU76 684 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 SEPT1Q8WYJ6 367 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 CEP170P1Q96L14 293 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 BAG1Q99933 345 aaPredicted RBP14.25□□□□□ -0.13
RAB5B-211ENST00000628569 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 GBP3Q9H0R5 595 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
RAB5B-211ENST00000628569 METTL14Q9HCE5 456 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms