RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 XBP1P17861 261 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 TMOD1P28289 359 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
UBR1-212ENST00000627960 CLCN3P51790 818 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 PRKCEQ02156 737 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 KIZQ2M2Z5 673 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 TIGD5Q53EQ6 642 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 MIER3Q7Z3K6 550 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 BANK1Q8NDB2 785 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 ETNPPLQ8TBG4 499 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 NECAB3Q96P71 396 aaPredicted RBP13.65□□□□□ -0.22
UBR1-212ENST00000627960 PPP1R16BQ96T49 567 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 OSMRQ99650 979 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 C11orf84Q9BUA3 381 aaPredicted RBP13.65□□□□□ -0.22
UBR1-212ENST00000627960 LMAN2LQ9H0V9 348 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 UBE2ZQ9H832 354 aaPredicted RBP13.65□□□□□ -0.22
UBR1-212ENST00000627960 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 LRFN2Q9ULH4 789 aa13.65□□□□□ -0.22
UBR1-212ENST00000627960 DENND3A2RUS2 1198 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 STBD1O95210 358 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 NLRP11P59045 1033 aaKnown RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 TARBP2Q15633 366 aaKnown RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 LRRC71Q8N4P6 559 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 WASF1Q92558 559 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 ADAM2Q99965 735 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 PLVAPQ9BX97 442 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 NIFKQ9BYG3 293 aaKnown RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 ADAMTS10Q9H324 1103 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 NSUN3Q9H649 340 aaKnown RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 C1orf112Q9NSG2 853 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 ORC3Q9UBD5 711 aaPredicted RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 DDX25Q9UHL0 483 aaKnown RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 AKT3Q9Y243 479 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
UBR1-212ENST00000627960 MRPL42Q9Y6G3 142 aaKnown RBP13.64□□□□□ -0.23
UBR1-212ENST00000627960 C9IYK1 514 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 GRM6O15303 877 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 SLC37A4O43826 429 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 FDPSP14324 419 aaKnown RBP13.63□□□□□ -0.23
UBR1-212ENST00000627960 FAM189BP81408 668 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 DSC3Q14574 896 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 ME3Q16798 604 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 LEXMQ3ZCV2 418 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 PAN2Q504Q3 1202 aaKnown RBP13.63□□□□□ -0.23
UBR1-212ENST00000627960 XKR3Q5GH77 459 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 TCEAL5Q5H9L2 206 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 PPP4R3AQ6IN85 833 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 SLC24A5Q71RS6 500 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 NEK8Q86SG6 692 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 NECAB1Q8N987 351 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 P2RX5Q93086 422 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 FAM20AQ96MK3 541 aa13.63□□□□□ -0.23
UBR1-212ENST00000627960 LARGE1O95461 756 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 SEC24BO95487 1268 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 GCFC2P16383 781 aaKnown RBP13.62□□□□□ -0.23
UBR1-212ENST00000627960 IBSPP21815 317 aaPredicted RBP13.62□□□□□ -0.23
UBR1-212ENST00000627960 KCNA5P22460 613 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 EIF4BP23588 611 aaKnown RBP13.62□□□□□ -0.23
UBR1-212ENST00000627960 GATMP50440 423 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 NEK4P51957 841 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 TBC1D8BQ0IIM8 1120 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 MTERF2Q49AM1 385 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 NAALADL2Q58DX5 795 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 PIK3AP1Q6ZUJ8 805 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 PABPC5Q96DU9 382 aaKnown RBP13.62□□□□□ -0.23
UBR1-212ENST00000627960 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 NAP1L4Q99733 375 aaKnown RBP13.62□□□□□ -0.23
UBR1-212ENST00000627960 KCNMB3Q9NPA1 279 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 SEPT9Q9UHD8 586 aaPredicted RBP13.62□□□□□ -0.23
UBR1-212ENST00000627960 PLAGL2Q9UPG8 496 aa13.62□□□□□ -0.23
UBR1-212ENST00000627960 PLXNA4Q9HCM2 1894 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 IGKV6-21A0A0C4DH24 114 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 TMEM150BA6NC51 233 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 DDX11L8A8MPP1 907 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 EML1O00423 815 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
UBR1-212ENST00000627960 MMP1P03956 469 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 GPC3P51654 580 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 PSMC5P62195 406 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 PPP2R5CQ13362 524 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 COL19A1Q14993 1142 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 EARS2Q5JPH6 523 aaKnown RBP13.61□□□□□ -0.23
UBR1-212ENST00000627960 FAM102BQ5T8I3 360 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.61□□□□□ -0.23
UBR1-212ENST00000627960 SPPL3Q8TCT6 385 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 NEK9Q8TD19 979 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 ELAC1Q9H777 363 aaKnown RBP13.61□□□□□ -0.23
UBR1-212ENST00000627960 ATP6V0A4Q9HBG4 840 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
UBR1-212ENST00000627960 TMEM161AQ9NX61 479 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 VAV3Q9UKW4 847 aa13.61□□□□□ -0.23
UBR1-212ENST00000627960 MUC3AQ02505 3323 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms