RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NLRX1Q86UT6 975 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 BANK1Q8NDB2 785 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 PIGOQ8TEQ8 1089 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 MYLIPQ8WY64 445 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 IWS1Q96ST2 819 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 SEZ6LQ9BYH1 1024 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 FGFBP2Q9BYJ0 223 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 GTPBP4Q9BZE4 634 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TBC1D22BQ9NU19 505 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 EXOC1Q9NV70 894 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 DNM3Q9UQ16 869 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 CTNND2Q9UQB3 1225 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 PCDHA2Q9Y5H9 948 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TRIM49BA6NDI0 452 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 SPATA31C2B4DYI2 1134 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 EYA4O95677 639 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 SSBP05455 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 MUTP22033 750 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 PPIGQ13427 754 aaKnown RBP eCLIP10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 ACVR2BQ13705 512 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 KCNA10Q16322 511 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 UGCGQ16739 394 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 HSP90AA4PQ58FG1 418 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 CDKAL1Q5VV42 579 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 GPBP1Q86WP2 473 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TPH2Q8IWU9 490 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TRIM44Q96DX7 344 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 LXNQ9BS40 222 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 RUSC1Q9BVN2 902 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TRIM5Q9C035 493 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 BHMT2Q9H2M3 363 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 INTS13Q9NVM9 706 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 ADD3Q9UEY8 706 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TCEAL9Q9UHQ7 104 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 RWDD2AQ9UIY3 292 aa10.55□□□□□ -0.72
PDLIM5-223ENST00000627587 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 SNAI1O95863 264 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 ICAM3P32942 547 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 CDK7P50613 346 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 RAD51AP2Q09MP3 1159 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 COASYQ13057 564 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 PAK1Q13153 545 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 GIT2Q14161 759 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 SPATA1Q5VX52 437 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 CCSAPQ6IQ19 270 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 MFSD5Q6N075 450 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 TTI2Q6NXR4 508 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 NELFBQ8WX92 580 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 MRFAP1L1Q96HT8 127 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 REEP2Q9BRK0 252 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 XPO4Q9C0E2 1151 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 SLC39A2Q9NP94 309 aa10.54□□□□□ -0.72
PDLIM5-223ENST00000627587 A0A0C4DFX4 3053 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 RSPH10B2B2RC85 870 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 EIF3JO75822 258 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 RSPH10BP0C881 870 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 ITGB8P26012 769 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 CDC25BP30305 580 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 GJA9P57773 515 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 NKX3-2P78367 333 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 FANCCQ00597 558 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 STIM1Q13586 685 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 STXBP2Q15833 593 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 RINT1Q6NUQ1 792 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 MIER3Q7Z3K6 550 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 IRF2BP1Q8IU81 584 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 TMEM199Q8N511 208 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 NAP1L5Q96NT1 182 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 DUSP9Q99956 384 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 SENP7Q9BQF6 1050 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 UPF3AQ9H1J1 476 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 IFNKQ9P0W0 207 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 ZHX1Q9UKY1 873 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 DNAH12Q6ZR08 3092 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 NFASCO94856 1347 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 A0A0U1RQG5 324 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 B4DLN1 442 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 ARVCFO00192 962 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 CABYRO75952 493 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 STBD1O95210 358 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 P4HBP07237 508 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 IDEP14735 1019 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 PPP1R2P41236 205 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 EPHB4P54760 987 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 CCDC144BQ3MJ40 725 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 MORC4Q8TE76 937 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 MPHOSPH6Q99547 160 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 POLD4Q9HCU8 107 aa10.53□□□□□ -0.72
PDLIM5-223ENST00000627587 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms