RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ZRSR1Q15695 479 aaKnown RBP16.44■□□□□ 0.22
PNKP-221ENST00000627317 POTEGQ6S5H5 508 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 RPAINQ86UA6 219 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 C4orf19Q8IY42 314 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 RASSF8Q8NHQ8 419 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 LEO1Q8WVC0 666 aaPredicted RBP16.44■□□□□ 0.22
PNKP-221ENST00000627317 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 CDK5RAP3Q96JB5 506 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 CLIC6Q96NY7 704 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 OSBPL7Q9BZF2 842 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 SCAND2PQ9GZW5 306 aaPredicted RBP16.44■□□□□ 0.22
PNKP-221ENST00000627317 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 WRAP73Q9P2S5 460 aaPredicted RBP16.44■□□□□ 0.22
PNKP-221ENST00000627317 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 KAT6AQ92794 2004 aa16.44■□□□□ 0.22
PNKP-221ENST00000627317 A0A0C4DFX4 3053 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 CUTAO60888 179 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 BAIAP3O94812 1187 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 SPATA31C1P0DKV0 1188 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 ATP2A2P16615 1042 aaKnown RBP16.43■□□□□ 0.22
PNKP-221ENST00000627317 YWHABP31946 246 aaKnown RBP16.43■□□□□ 0.22
PNKP-221ENST00000627317 TXLNAP40222 546 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 THPOP40225 353 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 ZNF484Q5JVG2 852 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 RUFY4Q6ZNE9 571 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 OTUD6AQ7L8S5 288 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 CABP7Q86V35 215 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 CATSPER3Q86XQ3 398 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 CDX2Q99626 313 aaPredicted RBP16.43■□□□□ 0.22
PNKP-221ENST00000627317 TUBE1Q9UJT0 475 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 RCOR1Q9UKL0 485 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 UNC80Q8N2C7 3258 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 TET1Q8NFU7 2136 aa16.43■□□□□ 0.22
PNKP-221ENST00000627317 TMEM150BA6NC51 233 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 SLC26A4O43511 780 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 LYPLA2O95372 231 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 ACTN1P12814 892 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 MUTP22033 750 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 WDR5P61964 334 aaKnown RBP16.42■□□□□ 0.22
PNKP-221ENST00000627317 RAB30Q15771 203 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 MTERF2Q49AM1 385 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 FAM26DQ5JW98 314 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 SPECC1Q5M775 1068 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 CNKSR3Q6P9H4 555 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 TRAPPC12Q8WVT3 735 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 CALML4Q96GE6 196 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 MMTAG2Q9BU76 263 aaKnown RBP16.42■□□□□ 0.22
PNKP-221ENST00000627317 ZNF576Q9H609 170 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 DDX19AQ9NUU7 478 aaKnown RBP16.42■□□□□ 0.22
PNKP-221ENST00000627317 PRUNE2Q8WUY3 3088 aa16.42■□□□□ 0.22
PNKP-221ENST00000627317 ZBBXA8MT70 800 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 RSPH10B2B2RC85 870 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 STBD1O95210 358 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 RSPH10BP0C881 870 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 RABGGTBP53611 331 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 GRIN2CQ14957 1233 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 XKR9Q5GH70 373 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 ANO5Q75V66 913 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 PHOSPHO2Q8TCD6 241 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 PIGOQ8TEQ8 1089 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
PNKP-221ENST00000627317 CEP170P1Q96L14 293 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 NACC1Q96RE7 527 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 SLC9A7Q96T83 725 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 NIFKQ9BYG3 293 aaKnown RBP16.41■□□□□ 0.22
PNKP-221ENST00000627317 NT5C3AQ9H0P0 336 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 GDPD2Q9HCC8 539 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 ANKEF1Q9NU02 776 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 KIAA1024Q9UPX6 916 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 PCDHA11Q9Y5I1 949 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 TCHHQ07283 1943 aa16.41■□□□□ 0.22
PNKP-221ENST00000627317 ZBTB42B2RXF5 422 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 MYOGP15173 224 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 MGAT3Q09327 533 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 TBC1D8BQ0IIM8 1120 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 ZNF579Q8NAF0 562 aaKnown RBP16.4■□□□□ 0.22
PNKP-221ENST00000627317 ZBTB10Q96DT7 871 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 EPSTI1Q96J88 318 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 SH2D3AQ9BRG2 576 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 CCSER1Q9C0I3 900 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 CYP26B1Q9NR63 512 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 PCDHA7Q9UN72 937 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 PPME1Q9Y570 386 aa16.4■□□□□ 0.22
PNKP-221ENST00000627317 TRIP12Q14669 1992 aaPredicted RBP16.4■□□□□ 0.22
PNKP-221ENST00000627317 ARHGEF35A5YM69 484 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 MAGEB2O15479 319 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 CHRNA1P02708 482 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 CTSHP09668 335 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 KLRC1P26715 233 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 POLGP54098 1239 aaPredicted RBP16.39■□□□□ 0.21
PNKP-221ENST00000627317 NPEPPSP55786 919 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 DEFB103AP81534 67 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 GRB10Q13322 594 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 KARSQ15046 597 aaKnown RBP16.39■□□□□ 0.21
PNKP-221ENST00000627317 TARBP2Q15633 366 aaKnown RBP16.39■□□□□ 0.21
PNKP-221ENST00000627317 ECM1Q16610 540 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 CSPP1Q1MSJ5 1256 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms