RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 DNM2P50570 870 aa25.07■■□□□ 1.6
SF1-220ENST00000626028 NEK9Q8TD19 979 aa25.07■■□□□ 1.6
SF1-220ENST00000626028 MTMR9Q96QG7 549 aa25.07■■□□□ 1.6
SF1-220ENST00000626028 CEP89Q96ST8 783 aa25.07■■□□□ 1.6
SF1-220ENST00000626028 A0A0C4DFX4 3053 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 IGKV6-21A0A0C4DH24 114 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 DDX11L8A8MPP1 907 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 FOSBP53539 338 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 ADGRE1Q14246 886 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 FAM117BQ6P1L5 589 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 ANO5Q75V66 913 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 NOSTRINQ8IVI9 506 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 BANK1Q8NDB2 785 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 TMX3Q96JJ7 454 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 ZSWIM4Q9H7M6 989 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 TTC12Q9H892 705 aaPredicted RBP25.06■■□□□ 1.6
SF1-220ENST00000626028 ERVK-5Q9HDB9 667 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 LMCD1Q9NZU5 365 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 AKT3Q9Y243 479 aa25.06■■□□□ 1.6
SF1-220ENST00000626028 VTNP04004 478 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 U2AF2P26368 475 aaKnown RBP eCLIP25.05■■□□□ 1.64e-8■■■■■ 44.5
SF1-220ENST00000626028 CLCN3P51790 818 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 GUCY1B3Q02153 619 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 GNL2Q13823 731 aaKnown RBP25.05■■□□□ 1.6
SF1-220ENST00000626028 KIZQ2M2Z5 673 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 MTERF2Q49AM1 385 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 OTUD6AQ7L8S5 288 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 CRIPAKQ8N1N5 446 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 ARNTL2Q8WYA1 636 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 SUGCTQ9HAC7 445 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 C1orf112Q9NSG2 853 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 GINS2Q9Y248 185 aa25.05■■□□□ 1.6
SF1-220ENST00000626028 FNDC1Q4ZHG4 1894 aaPredicted RBP25.04■■□□□ 1.6
SF1-220ENST00000626028 GTPBP6O43824 516 aaPredicted RBP25.04■■□□□ 1.6
SF1-220ENST00000626028 GAS2O43903 313 aaKnown RBP25.04■■□□□ 1.6
SF1-220ENST00000626028 MAFO75444 373 aaPredicted RBP25.04■■□□□ 1.6
SF1-220ENST00000626028 ARHGEF15O94989 841 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 UPP2O95045 317 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 STAG3L1P0CL83 205 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 NLRP11P59045 1033 aaKnown RBP25.04■■□□□ 1.6
SF1-220ENST00000626028 NCAPH2Q6IBW4 605 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 NPAS4Q8IUM7 802 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 TMEM40Q8WWA1 233 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 LXNQ9BS40 222 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 ADAMTS10Q9H324 1103 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 CDHR5Q9HBB8 845 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 CYP26B1Q9NR63 512 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 NOC2LQ9Y3T9 749 aaKnown RBP25.04■■□□□ 1.6
SF1-220ENST00000626028 RWDD3Q9Y3V2 267 aa25.04■■□□□ 1.6
SF1-220ENST00000626028 LYPLA2O95372 231 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 IGFBP4P22692 258 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 EIF4BP23588 611 aaKnown RBP25.03■■□□□ 1.6
SF1-220ENST00000626028 RFC5P40937 340 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 NFX1Q12986 1120 aaKnown RBP25.03■■□□□ 1.6
SF1-220ENST00000626028 RTN4RL1Q86UN2 441 aaPredicted RBP25.03■■□□□ 1.6
SF1-220ENST00000626028 LRRC71Q8N4P6 559 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 SLC7A3Q8WY07 619 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 OSMRQ99650 979 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 HSD17B14Q9BPX1 270 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 NOL7Q9UMY1 257 aaKnown RBP25.03■■□□□ 1.6
SF1-220ENST00000626028 ST3GAL5Q9UNP4 418 aa25.03■■□□□ 1.6
SF1-220ENST00000626028 GPC3P51654 580 aa25.02■■□□□ 1.6
SF1-220ENST00000626028 LINC01599Q8WXQ3 324 aa25.02■■□□□ 1.6
SF1-220ENST00000626028 ZNF689Q96CS4 500 aaPredicted RBP25.02■■□□□ 1.6
SF1-220ENST00000626028 TMX1Q9H3N1 280 aa25.02■■□□□ 1.6
SF1-220ENST00000626028 RC3H2Q9HBD1 1191 aaKnown RBP25.02■■□□□ 1.6
SF1-220ENST00000626028 RGS18Q9NS28 235 aa25.02■■□□□ 1.6
SF1-220ENST00000626028 REV3LO60673 3130 aa25.02■■□□□ 1.6
SF1-220ENST00000626028 WNT7AO00755 349 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 DGKIO75912 1065 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 YWHABP31946 246 aaKnown RBP25.01■■□□□ 1.59
SF1-220ENST00000626028 MCM7P33993 719 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 TXKP42681 527 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 SLC24A5Q71RS6 500 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 ZNF410Q86VK4 478 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.01■■□□□ 1.59
SF1-220ENST00000626028 EIF2AK1Q9BQI3 630 aaKnown RBP25.01■■□□□ 1.59
SF1-220ENST00000626028 BACH2Q9BYV9 841 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 DHX33Q9H6R0 707 aaKnown RBP25.01■■□□□ 1.59
SF1-220ENST00000626028 CERS4Q9HA82 394 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.01■■□□□ 1.59
SF1-220ENST00000626028 ADGRA3Q8IWK6 1321 aa25.01■■□□□ 1.59
SF1-220ENST00000626028 KIAA1671Q9BY89 1806 aa25■■□□□ 1.59
SF1-220ENST00000626028 DENND3A2RUS2 1198 aa25■■□□□ 1.59
SF1-220ENST00000626028 EPOPA6NHQ4 379 aa25■■□□□ 1.59
SF1-220ENST00000626028 SLITRK3O94933 977 aa25■■□□□ 1.59
SF1-220ENST00000626028 XRCC6P12956 609 aaKnown RBP eCLIP25■■□□□ 1.591e-7■■■□□ 17.8
SF1-220ENST00000626028 DARSP14868 501 aaKnown RBP25■■□□□ 1.59
SF1-220ENST00000626028 SARSP49591 514 aaKnown RBP25■■□□□ 1.59
SF1-220ENST00000626028 TMEM266Q2M3C6 531 aa25■■□□□ 1.59
SF1-220ENST00000626028 FAM228AQ86W67 206 aa25■■□□□ 1.59
SF1-220ENST00000626028 FIBCD1Q8N539 461 aa25■■□□□ 1.59
SF1-220ENST00000626028 DYDC2Q96IM9 177 aa25■■□□□ 1.59
SF1-220ENST00000626028 CEP170P1Q96L14 293 aa25■■□□□ 1.59
SF1-220ENST00000626028 INO80BQ9C086 356 aaPredicted RBP25■■□□□ 1.59
SF1-220ENST00000626028 RGL1Q9NZL6 768 aa25■■□□□ 1.59
SF1-220ENST00000626028 WRAP73Q9P2S5 460 aaPredicted RBP25■■□□□ 1.59
SF1-220ENST00000626028 MTCH2Q9Y6C9 303 aa25■■□□□ 1.59
SF1-220ENST00000626028 CD2BP2O95400 341 aaKnown RBP24.99■■□□□ 1.59
SF1-220ENST00000626028 GRB10Q13322 594 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms