RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 FAM187AA6NFU0 413 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 CCDC169A6NNP5 214 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 MINDY4BA8MYZ0 360 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 PGRMC1O00264 195 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 OPLAHO14841 1288 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 AHCYL1O43865 530 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 TLR2O60603 784 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 NOL4O94818 638 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 AGTP01019 485 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SSBP05455 408 aaKnown RBP eCLIP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 FCER1AP12319 257 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 PLCG1P19174 1290 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SKIV2L2P42285 1042 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 RWDD2BP57060 319 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 ASIC1P78348 528 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 MAP2K1Q02750 393 aaPredicted RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 BLMHQ13867 455 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 TRADDQ15628 312 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 CLUL1Q15846 466 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 GALNTL6Q49A17 601 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SBK1Q52WX2 424 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 TDRD12Q587J7 1177 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SLC27A3Q5K4L6 730 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM83BQ5T0W9 1011 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 LRRC55Q6ZSA7 311 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SV2BQ7L1I2 683 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 AMIGO3Q86WK7 504 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 ZC3H3Q8IXZ2 948 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SYCE1Q8N0S2 351 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 HELBQ8NG08 1087 aaPredicted RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 NSMCE1Q8WV22 266 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 UBLCP1Q8WVY7 318 aaPredicted RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 ATXN2LQ8WWM7 1075 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 CALML4Q96GE6 196 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 PSMB7Q99436 277 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 RIOK1Q9BRS2 568 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 ANKRD2Q9GZV1 360 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 RAB17Q9H0T7 212 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 NEUROG2Q9H2A3 272 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SLC5A4Q9NY91 659 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SUCLA2Q9P2R7 463 aaPredicted RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 SRP68Q9UHB9 627 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 NENFQ9UMX5 172 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 MINPP1Q9UNW1 487 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 RTCBQ9Y3I0 505 aaKnown RBP4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM205AQ6ZU69 1335 aa4.54□□□□□ -1.68
PTP4A1-205ENST00000626021 PHF20L1A8MW92 1017 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 E7ENQ6 273 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 O00370 1275 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 MAP3K7O43318 606 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 SLC26A4O43511 780 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 CTNND1O60716 968 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 FLOT1O75955 427 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 GFPT2O94808 682 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 LUC7L3O95232 432 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 FTCDO95954 541 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 OAS1P00973 400 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 FESP07332 822 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 OR52Z1P0C646 297 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 CYP7A1P22680 504 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 HMGB2P26583 209 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 TM4SF1P30408 202 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 GBP1P32455 592 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 HSPA1LP34931 641 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 PRKCIP41743 596 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 CCNHP51946 323 aaPredicted RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 FKBP3Q00688 224 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 KRT71Q3SY84 523 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 CRY2Q49AN0 593 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 ACCSLQ4AC99 568 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 KRT25Q7Z3Z0 450 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 LAPTM4BQ86VI4 370 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 DGKHQ86XP1 1220 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 KLHL7Q8IXQ5 586 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 ANKRD13CQ8N6S4 541 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 LRRC57Q8N9N7 239 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 OR2W6PQ8NHA6 318 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 SH3TC2Q8TF17 1288 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 AGAP11Q8TF27 550 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 TBC1D5Q92609 795 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 CELF1Q92879 486 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 SETDB2Q96T68 719 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 ROPN1BQ9BZX4 212 aaPredicted RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 STMN4Q9H169 189 aaPredicted RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 ROPN1Q9HAT0 212 aaPredicted RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 FAM207AQ9NSI2 230 aaPredicted RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 SAMD15Q9P1V8 674 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 UTP11Q9Y3A2 253 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 COL4A3BPQ9Y5P4 624 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 LOXHD1Q8IVV2 1947 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 hCG_1642624A0A1W2PR95 340 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 STXBP3O00186 592 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 KCNK3O14649 394 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 NKRFO15226 690 aaKnown RBP eCLIP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 CEP104O60308 925 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 SNX3O60493 162 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 ZPR1O75312 459 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 RPSAP08865 295 aaKnown RBP4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 RARAP10276 462 aa4.53□□□□□ -1.68
PTP4A1-205ENST00000626021 CHN1P15882 459 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms