RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ADAMTS20P59510 1910 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 NRKQ7Z2Y5 1582 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 LOC105371045A0A1W2PR82 267 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 ACOT7O00154 380 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 MAN2B1O00754 1011 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 NUAK1O60285 661 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 DNAJC8O75937 253 aaPredicted RBP4.54□□□□□ -1.68
CDKL5-208ENST00000624953 RASGRP1O95267 797 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 NPTXRO95502 500 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 COL6A1P12109 1028 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 AFF3P51826 1226 aaKnown RBP4.54□□□□□ -1.68
CDKL5-208ENST00000624953 GPR19Q15760 415 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 TCERG1LQ5VWI1 586 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 LIPIQ6XZB0 460 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 OVCH1Q7RTY7 1134 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 KIAA0907Q7Z7F0 614 aaPredicted RBP4.54□□□□□ -1.68
CDKL5-208ENST00000624953 NOSTRINQ8IVI9 506 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 MARCH10Q8NA82 808 aaPredicted RBP4.54□□□□□ -1.68
CDKL5-208ENST00000624953 KYQ8NBH2 561 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 FBXW5Q969U6 566 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 SYT3Q9BQG1 590 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 LUC7LQ9NQ29 371 aaKnown RBP4.54□□□□□ -1.68
CDKL5-208ENST00000624953 SFMBT1Q9UHJ3 866 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 DBR1Q9UK59 544 aaKnown RBP4.54□□□□□ -1.68
CDKL5-208ENST00000624953 PCDHA9Q9Y5H5 950 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 PCDHA8Q9Y5H6 950 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 TOPAZ1Q8N9V7 1692 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 LMO7Q8WWI1 1683 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 TECPR2O15040 1411 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 NAIPQ13075 1403 aa4.54□□□□□ -1.68
CDKL5-208ENST00000624953 PLEKHH1Q9ULM0 1364 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 ITSN1Q15811 1721 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 ESYT3A0FGR9 886 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 KRIT1O00522 736 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 SLC27A2O14975 620 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 MAFKO60675 156 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 CYP2C8P10632 490 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 FAHP16930 419 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 POU3F2P20265 443 aaPredicted RBP4.53□□□□□ -1.68
CDKL5-208ENST00000624953 SPIRE1Q08AE8 756 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 TUSC3Q13454 348 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 FIGNQ5HY92 759 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 KCTD1Q719H9 257 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 NOP9Q86U38 636 aaKnown RBP4.53□□□□□ -1.68
CDKL5-208ENST00000624953 UNC5CLQ8IV45 518 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 TRIM48Q8IWZ4 208 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 NLGN1Q8N2Q7 840 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 DTX3Q8N9I9 347 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 DLG3Q92796 817 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 TOE1Q96GM8 510 aaKnown RBP4.53□□□□□ -1.68
CDKL5-208ENST00000624953 PWWP2AQ96N64 755 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 ALG1Q9BT22 464 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 IRF2BPLQ9H1B7 796 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 PMF1-BGLAPU3KQ54 211 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 HFM1A2PYH4 1435 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 LRRC37A3O60309 1634 aa4.53□□□□□ -1.68
CDKL5-208ENST00000624953 ROCK1Q13464 1354 aa4.53□□□□□ -1.69
CDKL5-208ENST00000624953 ARHGEF28Q8N1W1 1705 aaKnown RBP4.52□□□□□ -1.69
CDKL5-208ENST00000624953 FAM90A27PA6NNH2 459 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 PPP1R12AO14974 1030 aaPredicted RBP4.52□□□□□ -1.69
CDKL5-208ENST00000624953 ZNF28P17035 718 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 HOXA5P20719 270 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 RPL13P26373 211 aaKnown RBP4.52□□□□□ -1.69
CDKL5-208ENST00000624953 STAT5AP42229 794 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 CTSWP56202 376 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 GUCY1A3Q02108 690 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 TKFCQ3LXA3 575 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 PAN2Q504Q3 1202 aaKnown RBP4.52□□□□□ -1.69
CDKL5-208ENST00000624953 CREB3L3Q68CJ9 461 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 FSTL4Q6MZW2 842 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.52□□□□□ -1.69
CDKL5-208ENST00000624953 ZNF526Q8TF50 670 aaPredicted RBP4.52□□□□□ -1.69
CDKL5-208ENST00000624953 XYLT2Q9H1B5 865 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 INTS7Q9NVH2 962 aaKnown RBP4.52□□□□□ -1.69
CDKL5-208ENST00000624953 NDOR1Q9UHB4 597 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 DSEQ9UL01 958 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 TNS3Q68CZ2 1445 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 SHANK3Q9BYB0 1731 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 NUP155O75694 1391 aa4.52□□□□□ -1.69
CDKL5-208ENST00000624953 SPATA31A3Q5VYP0 1347 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 NPHP3Q7Z494 1330 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 NRXN1Q9ULB1 1477 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 COL18A1P39060 1754 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 CCDC66A2RUB6 948 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 CLASP2O75122 1294 aaKnown RBP4.51□□□□□ -1.69
CDKL5-208ENST00000624953 LTFP02788 710 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 ZBTB48P10074 688 aaPredicted RBP4.51□□□□□ -1.69
CDKL5-208ENST00000624953 PYGMP11217 842 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 GNAT1P11488 350 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 COL6A2P12110 1019 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 PDE6AP16499 860 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 R3HDM1Q15032 1099 aaKnown RBP4.51□□□□□ -1.69
CDKL5-208ENST00000624953 SEC23AQ15436 765 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 VPS72Q15906 364 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 TM4SF20Q53R12 229 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 PLEKHG4Q58EX7 1191 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 MTDHQ86UE4 582 aaKnown RBP4.51□□□□□ -1.69
CDKL5-208ENST00000624953 ZC3H18Q86VM9 953 aaKnown RBP4.51□□□□□ -1.69
CDKL5-208ENST00000624953 TTLL6Q8N841 843 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms