RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FLOT1O75955 427 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 ICAM1P05362 532 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 ARP10275 920 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 EPHB4P54760 987 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 NAP1L1P55209 391 aaKnown RBP10.31□□□□□ -0.76
PDPN-212ENST00000621990 MYBPC2Q14324 1141 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 SLFN11Q7Z7L1 901 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 LDHDQ86WU2 507 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 FAM186BQ8IYM0 893 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 OGFOD1Q8N543 542 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 GOLGA5Q8TBA6 731 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 AGPAT3Q9NRZ7 376 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 ZNF536O15090 1300 aa10.31□□□□□ -0.76
PDPN-212ENST00000621990 SFI1A8K8P3 1242 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 IPO5O00410 1097 aaKnown RBP10.3□□□□□ -0.76
PDPN-212ENST00000621990 ZBTB39O15060 712 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 CLIC2O15247 247 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 CHMP2AO43633 222 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 FTCDO95954 541 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 FERP16591 822 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 HNRNPH2P55795 449 aaKnown RBP10.3□□□□□ -0.76
PDPN-212ENST00000621990 MAPK7Q13164 816 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 PPP2R5AQ15172 486 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 IFI16Q16666 785 aaKnown RBP10.3□□□□□ -0.76
PDPN-212ENST00000621990 ZC2HC1CQ53FD0 456 aaPredicted RBP10.3□□□□□ -0.76
PDPN-212ENST00000621990 C8orf74Q6P047 294 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 SLC30A10Q6XR72 485 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 SLC30A5Q8TAD4 765 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 SH3GL2Q99962 352 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 MXRA8Q9BRK3 442 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 SYT11Q9BT88 431 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 TEKT3Q9BXF9 490 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 FER1L6Q2WGJ9 1857 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 PPP1R12BO60237 982 aaPredicted RBP10.3□□□□□ -0.76
PDPN-212ENST00000621990 MAPTP10636 758 aaKnown RBP10.3□□□□□ -0.76
PDPN-212ENST00000621990 ITGB5P18084 799 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 GGCXP38435 758 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 LMAN1P49257 510 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 NPEPPSP55786 919 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 ALKBH5Q6P6C2 394 aaKnown RBP10.3□□□□□ -0.76
PDPN-212ENST00000621990 CDAN1Q8IWY9 1227 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 FAM178BQ8IXR5 827 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 DAW1Q8N136 415 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 AGBL3Q8NEM8 1001 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 LXNQ9BS40 222 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 TMEM39BQ9GZU3 492 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 FAM204AQ9H8W3 233 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 PCDHB13Q9Y5F0 798 aa10.3□□□□□ -0.76
PDPN-212ENST00000621990 F8VZ95 297 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 RAD17O75943 681 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 ASNSP08243 561 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 ACTN2P35609 894 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 FMO5P49326 533 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
PDPN-212ENST00000621990 SLC7A5Q01650 507 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 TCERG1LQ5VWI1 586 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 HS2ST1Q7LGA3 356 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 TTLL6Q8N841 843 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 STK33Q9BYT3 514 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 GPR88Q9GZN0 384 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 IKZF4Q9H2S9 585 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 POLD4Q9HCU8 107 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 FBXO28Q9NVF7 368 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.29□□□□□ -0.76
PDPN-212ENST00000621990 GOLGA6BA6NDN3 693 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 DDX3XO00571 662 aaKnown RBP eCLIP10.29□□□□□ -0.76
PDPN-212ENST00000621990 DHX15O43143 795 aaKnown RBP10.29□□□□□ -0.76
PDPN-212ENST00000621990 STAT1P42224 750 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 MATR3P43243 847 aaKnown RBP eCLIP10.29□□□□□ -0.76
PDPN-212ENST00000621990 UBXN2AP68543 259 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 COG2Q14746 738 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 ZSCAN26Q16670 478 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 VPS36Q86VN1 386 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 FMNL3Q8IVF7 1028 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 IFT20Q8IY31 132 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 EIF1ADQ8N9N8 165 aaKnown RBP10.29□□□□□ -0.76
PDPN-212ENST00000621990 USP38Q8NB14 1042 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 TPCN2Q8NHX9 752 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 ACTRT1Q8TDG2 376 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 PBKQ96KB5 322 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 GDAP1L1Q96MZ0 367 aa10.29□□□□□ -0.76
PDPN-212ENST00000621990 GLIS2Q9BZE0 524 aaPredicted RBP10.29□□□□□ -0.76
PDPN-212ENST00000621990 A0A0U1RQG5 324 aaPredicted RBP10.28□□□□□ -0.76
PDPN-212ENST00000621990 PHF20L1A8MW92 1017 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 KIF4AO95239 1232 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 LYPLA2O95372 231 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 GLI1P08151 1106 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 RFX1P22670 979 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 SOX5P35711 763 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 ODR4Q5SWX8 454 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 ALS2CLQ60I27 953 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 GJB7Q6PEY0 223 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 SND1Q7KZF4 910 aaKnown RBP eCLIP10.28□□□□□ -0.76
PDPN-212ENST00000621990 C12orf56Q8IXR9 622 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 LARGE2Q8N3Y3 721 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 MREGQ8N565 214 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 CAMKK2Q96RR4 588 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 DBR1Q9UK59 544 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms