RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 LRRC41Q15345 812 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 TARBP2Q15633 366 aaKnown RBP11.8□□□□□ -0.52
CPNE3-212ENST00000621783 GUF1Q8N442 669 aaKnown RBP11.8□□□□□ -0.52
CPNE3-212ENST00000621783 MYCT1Q8N699 235 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 ENOX1Q8TC92 643 aaKnown RBP11.8□□□□□ -0.52
CPNE3-212ENST00000621783 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
CPNE3-212ENST00000621783 DHTKD1Q96HY7 919 aaPredicted RBP11.8□□□□□ -0.52
CPNE3-212ENST00000621783 CEP89Q96ST8 783 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 ATP6V0A4Q9HBG4 840 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 GPRC5CQ9NQ84 441 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 XPNPEP1Q9NQW7 623 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 NRBP2Q9NSY0 501 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 ERAP1Q9NZ08 941 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 SEL1LQ9UBV2 794 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 RWDD2AQ9UIY3 292 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
CPNE3-212ENST00000621783 TRIM49BA6NDI0 452 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 DYNC1LI2O43237 492 aaPredicted RBP11.79□□□□□ -0.52
CPNE3-212ENST00000621783 ADCY3O60266 1144 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 MYBP10242 640 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 CCNE1P24864 410 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 RFC5P40937 340 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 CASP5P51878 434 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 POLGP54098 1239 aaPredicted RBP11.79□□□□□ -0.52
CPNE3-212ENST00000621783 TPM4P67936 248 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 CACNB2Q08289 660 aaPredicted RBP11.79□□□□□ -0.52
CPNE3-212ENST00000621783 FAM102BQ5T8I3 360 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 EPM2AIP1Q7L775 607 aaPredicted RBP11.79□□□□□ -0.52
CPNE3-212ENST00000621783 MYOCDQ8IZQ8 938 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 MCPH1Q8NEM0 835 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 P2RX5Q93086 422 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 DRC1Q96MC2 740 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 FIZ1Q96SL8 496 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 C16orf70Q9BSU1 422 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 HSD3B7Q9H2F3 369 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 DHX33Q9H6R0 707 aaKnown RBP11.79□□□□□ -0.52
CPNE3-212ENST00000621783 PDLIM7Q9NR12 457 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
CPNE3-212ENST00000621783 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 Q9Y3F1 56 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 NFE2L3Q9Y4A8 694 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 PPME1Q9Y570 386 aa11.79□□□□□ -0.52
CPNE3-212ENST00000621783 MYH11P35749 1972 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 A6NJR5 290 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 ZBTB42B2RXF5 422 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 AP5Z1O43299 807 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 HBP1O60381 514 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 DUSP11O75319 330 aaKnown RBP11.78□□□□□ -0.52
CPNE3-212ENST00000621783 PPFIA4O75335 1185 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 GCNT3O95395 438 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 HMGCRP04035 888 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 PLS3P13797 630 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
CPNE3-212ENST00000621783 CCND3P30281 292 aaPredicted RBP11.78□□□□□ -0.52
CPNE3-212ENST00000621783 PMS1P54277 932 aaKnown RBP11.78□□□□□ -0.52
CPNE3-212ENST00000621783 SOX10P56693 466 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
CPNE3-212ENST00000621783 ARHGEF6Q15052 776 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 DGKDQ16760 1214 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 BMT2Q1RMZ1 405 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 ODR4Q5SWX8 454 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 SPATA1Q5VX52 437 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 TTI2Q6NXR4 508 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 FAM178BQ8IXR5 827 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 SCFD1Q8WVM8 642 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 KIFAP3Q92845 792 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 AP5M1Q9H0R1 490 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 POLR3FQ9H1D9 316 aaPredicted RBP11.78□□□□□ -0.52
CPNE3-212ENST00000621783 SEMA6BQ9H3T3 888 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 MRPL44Q9H9J2 332 aaKnown RBP11.78□□□□□ -0.52
CPNE3-212ENST00000621783 UBE4BO95155 1302 aa11.78□□□□□ -0.52
CPNE3-212ENST00000621783 BICDL2A1A5D9 508 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 K7ENM7 598 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 EIF3DO15371 548 aaKnown RBP eCLIP11.77□□□□□ -0.53
CPNE3-212ENST00000621783 SEPT4O43236 478 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 KIF20AO95235 890 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 F2P00734 622 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 MAPTP10636 758 aaKnown RBP11.77□□□□□ -0.53
CPNE3-212ENST00000621783 CNGA1P29973 690 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 NMT1P30419 496 aaKnown RBP11.77□□□□□ -0.53
CPNE3-212ENST00000621783 DEKP35659 375 aaKnown RBP11.77□□□□□ -0.53
CPNE3-212ENST00000621783 CPT1AP50416 773 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 PRMT2P55345 433 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 ZCWPW2Q504Y3 356 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 MAP3K21Q5TCX8 1036 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 CENPPQ6IPU0 288 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 NELFCDQ8IXH7 590 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 PXYLP1Q8TE99 480 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 TRAPPC12Q8WVT3 735 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 SLC7A3Q8WY07 619 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 BSNDQ8WZ55 320 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
CPNE3-212ENST00000621783 RNPEPQ9H4A4 650 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 FANCLQ9NW38 375 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 LARSQ9P2J5 1176 aaKnown RBP11.77□□□□□ -0.53
CPNE3-212ENST00000621783 COL1A2P08123 1366 aa11.77□□□□□ -0.53
CPNE3-212ENST00000621783 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms