RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 NFU1Q9UMS0 254 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 NOC2LQ9Y3T9 749 aaKnown RBP3.54□□□□□ -1.84
U1.39-201ENST00000621562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.54□□□□□ -1.84
U1.39-201ENST00000621562 SHROOM3Q8TF72 1996 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 MYLKQ15746 1914 aa3.54□□□□□ -1.84
U1.39-201ENST00000621562 GOLGA6CA6NDK9 693 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SRRM3A6NNA2 597 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 F5H6K3 240 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 F8VZ95 297 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ZBTB39O15060 712 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CLIC2O15247 247 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 DHX15O43143 795 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 EVI5O60447 810 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 PLA2G6O60733 806 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SLITRK3O94933 977 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 TRIM37O94972 964 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 GH2P01242 217 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 GOLGA6DP0CG33 693 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 BMP3P12645 472 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ALAS1P13196 640 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ITGA4P13612 1032 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 FERP16591 822 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 MUTP22033 750 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 HOXA13P31271 388 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 ECE1P42892 770 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 FMO5P49326 533 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 IRAK1P51617 712 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 PRELPP51888 382 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 GALCP54803 685 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 HADHBP55084 474 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 NPEPPSP55786 919 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CYP4A11Q02928 519 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 KLRC3Q07444 240 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 TCP10Q12799 353 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SPP2Q13103 211 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 PAK2Q13177 524 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 BYSLQ13895 437 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 CTTNQ14247 550 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 KIF22Q14807 665 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 TCEAL1Q15170 157 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 EXOC3L4Q17RC7 722 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 KIAA0753Q2KHM9 967 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ABCB5Q2M3G0 1257 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 USH1GQ495M9 461 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CFAP221Q4G0U5 840 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CBWD6Q4V339 395 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 EPC2Q52LR7 807 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ZC2HC1CQ53FD0 456 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 HSP90B2PQ58FF3 399 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CBWD3Q5JTY5 395 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CBWD5Q5RIA9 395 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 C10orf76Q5T2E6 689 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ALS2CLQ60I27 953 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 STYK1Q6J9G0 422 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ALKBH5Q6P6C2 394 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 LRIG3Q6UXM1 1119 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 LEKR1Q6ZMV7 388 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 GBP6Q6ZN66 633 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 OTOP1Q7RTM1 612 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 NT5DC3Q86UY8 548 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 KIAA0825Q8IV33 1275 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SLC9A9Q8IVB4 645 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CDAN1Q8IWY9 1227 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 C12orf56Q8IXR9 622 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 FAM186BQ8IYM0 893 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SH2D3CQ8N5H7 860 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ZSWIM2Q8NEG5 633 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 IL31RAQ8NI17 732 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ACER1Q8TDN7 264 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 WHAMMQ8TF30 809 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 TMEM174Q8WUU8 243 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 RFFLQ8WZ73 363 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ARHGEF26Q96DR7 871 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 DYDC2Q96IM9 177 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ZBED3Q96IU2 234 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 PBKQ96KB5 322 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CCDC43Q96MW1 224 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 TRERF1Q96PN7 1200 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 KRT12Q99456 494 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 MKNK1Q9BUB5 465 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ZC3H12CQ9C0D7 883 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 INTS2Q9H0H0 1204 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 TSPYL1Q9H0U9 437 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ISCUQ9H1K1 167 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 BHMT2Q9H2M3 363 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 UNC45AQ9H3U1 944 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 PLEKHA4Q9H4M7 779 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 TAF1DQ9H5J8 278 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 TMBIM4Q9HC24 238 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 EPB41L5Q9HCM4 733 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 POLD4Q9HCU8 107 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 ERVK-5Q9HDB9 667 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 AGPAT3Q9NRZ7 376 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 GOLGA6AQ9NYA3 693 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 RGL1Q9NZL6 768 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 CWC15Q9P013 229 aaKnown RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 GCNT4Q9P109 453 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 COL20A1Q9P218 1284 aa3.53□□□□□ -1.84
U1.39-201ENST00000621562 SUCLA2Q9P2R7 463 aaPredicted RBP3.53□□□□□ -1.84
U1.39-201ENST00000621562 PI4KBQ9UBF8 816 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms