RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 USO1O60763 962 aaKnown RBP23.32■■□□□ 1.32
LIME1-210ENST00000621325 NR3C2P08235 984 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 PON1P27169 355 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 YWHABP31946 246 aaKnown RBP23.32■■□□□ 1.32
LIME1-210ENST00000621325 VSIG10LQ86VR7 867 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 MLXIPQ9HAP2 919 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 METTL14Q9HCE5 456 aaKnown RBP23.32■■□□□ 1.32
LIME1-210ENST00000621325 AGPAT3Q9NRZ7 376 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 AFG3L2Q9Y4W6 797 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 MYH11P35749 1972 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 PPP1R37O75864 691 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 DDNO94850 711 aaPredicted RBP23.32■■□□□ 1.32
LIME1-210ENST00000621325 CYP2J2P51589 502 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 EXOC3L4Q17RC7 722 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 FAM186BQ8IYM0 893 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 FAM133AQ8N9E0 248 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.32■■□□□ 1.323e-7■■□□□ 11.4
LIME1-210ENST00000621325 SYN2Q92777 582 aaPredicted RBP23.32■■□□□ 1.32
LIME1-210ENST00000621325 STRA6Q9BX79 667 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 DBR1Q9UK59 544 aaKnown RBP23.32■■□□□ 1.32
LIME1-210ENST00000621325 TELO2Q9Y4R8 837 aa23.32■■□□□ 1.32
LIME1-210ENST00000621325 PEX10O60683 326 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 SRGAP2O75044 1071 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 USP2O75604 605 aaPredicted RBP23.31■■□□□ 1.32
LIME1-210ENST00000621325 SLC9C1Q4G0N8 1177 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 TRAPPC11Q7Z392 1133 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 CEP112Q8N8E3 955 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 GBP3Q9H0R5 595 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 FHOD1Q9Y613 1164 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 SSU72P8A0A1W2PR75 194 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 K7ENM7 598 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 BACH1O14867 736 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 SERPING1P05155 500 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 MAGEA1P43355 309 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 TUBB2AQ13885 445 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 ANKRD13CQ8N6S4 541 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 EHBP1Q8NDI1 1231 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 TUBB2BQ9BVA1 445 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 NUCKS1Q9H1E3 243 aaKnown RBP23.31■■□□□ 1.32
LIME1-210ENST00000621325 TMOD4Q9NZQ9 345 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 CAPN6Q9Y6Q1 641 aa23.31■■□□□ 1.32
LIME1-210ENST00000621325 TISP43B9A030 160 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 RGS20O76081 388 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 UCHL3P15374 230 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 PSMC2P35998 433 aaKnown RBP23.3■■□□□ 1.32
LIME1-210ENST00000621325 NPEPPSP55786 919 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 KLHDC7AQ5VTJ3 777 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 PLA2G4FQ68DD2 849 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 HS2ST1Q7LGA3 356 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 CNKSR2Q8WXI2 1034 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 RABGGTAQ92696 567 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 GPRC5CQ9NQ84 441 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 AJAP1Q9UKB5 411 aaPredicted RBP23.3■■□□□ 1.32
LIME1-210ENST00000621325 UBE4BO95155 1302 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 SPDYE16A6NNV3 312 aaPredicted RBP23.3■■□□□ 1.32
LIME1-210ENST00000621325 LYPLA2O95372 231 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 CCND2P30279 289 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 OAZ1P54368 228 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 NFIL3Q16649 462 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 SUPT20HL1Q3ZLR7 823 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 NOL9Q5SY16 702 aaKnown RBP23.3■■□□□ 1.32
LIME1-210ENST00000621325 GPR161Q8N6U8 529 aaKnown RBP23.3■■□□□ 1.32
LIME1-210ENST00000621325 A1CFQ9NQ94 594 aaKnown RBP23.3■■□□□ 1.32
LIME1-210ENST00000621325 DMAC2Q9NW81 257 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 SALL4Q9UJQ4 1053 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 PPP2R3BQ9Y5P8 575 aa23.3■■□□□ 1.32
LIME1-210ENST00000621325 WHAMMP3Q1A5X7 153 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.29■■□□□ 1.32
LIME1-210ENST00000621325 STXBP4Q6ZWJ1 553 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 TEX13BQ9BXU2 312 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 TSGA10Q9BZW7 698 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 SIX2Q9NPC8 291 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 PLCB1Q9NQ66 1216 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 CYP39A1Q9NYL5 469 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 DDX41Q9UJV9 622 aaKnown RBP23.29■■□□□ 1.32
LIME1-210ENST00000621325 WDR64B1ANS9 1081 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 MOCS3O95396 460 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 VGLL4Q14135 290 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 GJB7Q6PEY0 223 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 SYCP3Q8IZU3 236 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 PARD6BQ9BYG5 372 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 AIPL1Q9NZN9 384 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 GCNT4Q9P109 453 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 SNCAIPQ9Y6H5 919 aa23.29■■□□□ 1.32
LIME1-210ENST00000621325 PSMC5P62195 406 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 PAPD7Q5XG87 772 aaKnown RBP23.28■■□□□ 1.32
LIME1-210ENST00000621325 C4orf19Q8IY42 314 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 LARSQ9P2J5 1176 aaKnown RBP23.28■■□□□ 1.32
LIME1-210ENST00000621325 TCEAL9Q9UHQ7 104 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 LOXHD1Q8IVV2 1947 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 ERICH4A6NGS2 130 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 JAK3P52333 1124 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 KRT76Q01546 638 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 ASIC2Q16515 512 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 GBP6Q6ZN66 633 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 RDH13Q8NBN7 331 aa23.28■■□□□ 1.32
LIME1-210ENST00000621325 NSUN6Q8TEA1 469 aaKnown RBP23.28■■□□□ 1.32
LIME1-210ENST00000621325 CCDC43Q96MW1 224 aaKnown RBP23.28■■□□□ 1.32
LIME1-210ENST00000621325 INPP4AQ96PE3 977 aaPredicted RBP23.28■■□□□ 1.32
LIME1-210ENST00000621325 RBAK-RBAKDNI3L0D1 243 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms