RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ADCY1Q08828 1119 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 PRR5LQ6MZQ0 368 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 RNF207Q6ZRF8 634 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 C7orf25Q9BPX7 421 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 HPCAL4Q9UM19 191 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 JRKLQ9Y4A0 524 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 DOT1LQ8TEK3 1739 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 RASSF10A6NK89 507 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 SNX16P57768 344 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 MIIPQ5JXC2 388 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 SLC10A5Q5PT55 438 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 C8orf74Q6P047 294 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 TMED8Q6PL24 325 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 DAGLBQ8NCG7 672 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 SMC1BQ8NDV3 1235 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 KMT5AQ9NQR1 393 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 FEZ2Q9UHY8 353 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 LRFN2Q9ULH4 789 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 FLT1P17948 1338 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 GOLGA6CA6NDK9 693 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 ZNF263O14978 683 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 TNNC2P02585 160 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 GOLGA6DP0CG33 693 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 AKR1B1P15121 316 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 PPP1R2P41236 205 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 GFPT1Q06210 699 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 TTC19Q6DKK2 380 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 CYFIP1Q7L576 1253 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 CPLX4Q7Z7G2 160 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 NOP9Q86U38 636 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 HDAC7Q8WUI4 952 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 SKA2Q8WVK7 121 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 LRRC45Q96CN5 670 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 LRRC1Q9BTT6 524 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 DHX36Q9H2U1 1008 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 GOLGA6AQ9NYA3 693 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 ARHGAP20Q9P2F6 1191 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 TPRP12270 2363 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 MYL3P08590 195 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 GUCY2FP51841 1108 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 MAN2A1Q16706 1144 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 ANGEL2Q5VTE6 544 aaKnown RBP8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 GLIS3Q8NEA6 775 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 FAM76AQ8TAV0 307 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 MGARPQ8TDB4 240 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 DDX12PQ92771 950 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 TTYH3Q9C0H2 523 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 ABCF3Q9NUQ8 709 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 TMEM51Q9NW97 253 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 ABCA3Q99758 1704 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 ANO9A1A5B4 782 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 KCNK3O14649 394 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 SLC37A4O43826 429 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 VIMP08670 466 aaKnown RBP8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 MESDQ14696 234 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 SMAD1Q15797 465 aaKnown RBP8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 ASPRV1Q53RT3 343 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 RC3H1Q5TC82 1133 aaKnown RBP8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 TTC30AQ86WT1 665 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 RYBPQ8N488 228 aaPredicted RBP8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 BANK1Q8NDB2 785 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 ATP6V0A1Q93050 837 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 ERGIC2Q96RQ1 377 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 SPZ1Q9BXG8 430 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 DPH5Q9H2P9 285 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 MTRF1LQ9UGC7 380 aaKnown RBP8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 SNX12Q9UMY4 172 aa8.96□□□□□ -0.97
PTPDC1-204ENST00000620992 MYH10P35580 1976 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 DPEP1P16444 411 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 DYNLT1P63172 113 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 TNNC1P63316 161 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 CCNI2Q6ZMN8 369 aaPredicted RBP8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 CATSPER4Q7RTX7 472 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 SRLQ86TD4 932 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 CCDC125Q86Z20 511 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 MMTAG2Q9BU76 263 aaKnown RBP8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 RNF146Q9NTX7 359 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 DMGDHQ9UI17 866 aaKnown RBP8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 GRB10Q13322 594 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 RPS6KA1Q15418 735 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 UNC13DQ70J99 1090 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 CEP57Q86XR8 500 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 OSBPL9Q96SU4 736 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 NUDT12Q9BQG2 462 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 SUDS3Q9H7L9 328 aaPredicted RBP8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 GGA3Q9NZ52 723 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 MKRN1Q9UHC7 482 aaKnown RBP8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 PLAGL2Q9UPG8 496 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 HYOU1Q9Y4L1 999 aa8.96□□□□□ -0.98
PTPDC1-204ENST00000620992 K7ERI5 159 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 SYF2O95926 243 aaKnown RBP8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 FOSP01100 380 aaPredicted RBP8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 CYP2B6P20813 491 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 SPATA4Q8NEY3 305 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 TULP2O00295 520 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 SSTR3P32745 418 aaPredicted RBP8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 PIK3CAP42336 1068 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms