RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 ZEB2O60315 1214 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 ZBTB48P10074 688 aaPredicted RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 GJA4P35212 333 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 STAT5AP42229 794 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 CDKN1CP49918 316 aaPredicted RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 NCKAP1LP55160 1127 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 YBX1P67809 324 aaKnown RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 PAN2Q504Q3 1202 aaKnown RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 IQSEC1Q6DN90 963 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 AMIGO3Q86WK7 504 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 NOSTRINQ8IVI9 506 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 PRPF38AQ8NAV1 312 aaKnown RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 ERCC4Q92889 916 aaPredicted RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 TOE1Q96GM8 510 aaKnown RBP5.67□□□□□ -1.5
SEM1-220ENST00000619259 PANK3Q9H999 370 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 KCNH7Q9NS40 1196 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 DTLQ9NZJ0 730 aa5.67□□□□□ -1.5
SEM1-220ENST00000619259 USP32Q8NFA0 1604 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 RAB11FIP3O75154 756 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 EYA4O95677 639 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 NCAM1P13591 858 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 BPIP17213 487 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 POU3F3P20264 500 aaPredicted RBP5.66□□□□□ -1.5
SEM1-220ENST00000619259 PMLP29590 882 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 LSSP48449 732 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 GUCY2FP51841 1108 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 EPHA5P54756 1037 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 GGT6Q6P531 493 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 HDGFL2Q7Z4V5 671 aaPredicted RBP5.66□□□□□ -1.5
SEM1-220ENST00000619259 ZC3H18Q86VM9 953 aaKnown RBP5.66□□□□□ -1.5
SEM1-220ENST00000619259 ELF4Q99607 663 aaPredicted RBP5.66□□□□□ -1.5
SEM1-220ENST00000619259 EMC7Q9NPA0 242 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 HOMER2Q9NSB8 354 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.66□□□□□ -1.5
SEM1-220ENST00000619259 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 APOBEC2Q9Y235 224 aaKnown RBP5.66□□□□□ -1.5
SEM1-220ENST00000619259 FAN1Q9Y2M0 1017 aa5.66□□□□□ -1.5
SEM1-220ENST00000619259 CENPJQ9HC77 1338 aaPredicted RBP5.66□□□□□ -1.5
SEM1-220ENST00000619259 ACOT7O00154 380 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 GPR39O43194 453 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 ASGR2P07307 311 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 HMGB1P09429 215 aaKnown RBP5.65□□□□□ -1.5
SEM1-220ENST00000619259 HSP90B1P14625 803 aaKnown RBP5.65□□□□□ -1.5
SEM1-220ENST00000619259 FAHP16930 419 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 PFKLP17858 780 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 NKX3-2P78367 333 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 SEC23AQ15436 765 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 RNF219Q5W0B1 726 aaPredicted RBP5.65□□□□□ -1.5
SEM1-220ENST00000619259 FAM126BQ8IXS8 530 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 FAM9BQ8IZU0 186 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 FAM26EQ8N5C1 309 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 EFHBQ8N7U6 833 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 HIPK4Q8NE63 616 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 KCNN1Q92952 543 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 SGPP1Q9BX95 441 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 MCOLN1Q9GZU1 580 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 ACSS2Q9NR19 701 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 SLC5A4Q9NY91 659 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 ARHGAP28Q9P2N2 729 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 NUDCQ9Y266 331 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 SPO11Q9Y5K1 396 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 B3GALT1Q9Y5Z6 326 aa5.65□□□□□ -1.5
SEM1-220ENST00000619259 NINLQ9Y2I6 1382 aa5.65□□□□□ -1.51
SEM1-220ENST00000619259 KIF13AQ9H1H9 1805 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.64□□□□□ -1.51
SEM1-220ENST00000619259 ALG1L2C9J202 215 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 HRKO00198 91 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 DVL2O14641 736 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 FOXP2O15409 715 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 C4BPAP04003 597 aaKnown RBP5.64□□□□□ -1.51
SEM1-220ENST00000619259 IDI1Q13907 227 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 TARBP2Q15633 366 aaKnown RBP5.64□□□□□ -1.51
SEM1-220ENST00000619259 DDB1Q16531 1140 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 CC2D1AQ6P1N0 951 aaPredicted RBP5.64□□□□□ -1.51
SEM1-220ENST00000619259 TEPPQ6URK8 271 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 FERMT3Q86UX7 667 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 LDHDQ86WU2 507 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 SPATS2Q86XZ4 545 aaKnown RBP5.64□□□□□ -1.51
SEM1-220ENST00000619259 TTLL11Q8NHH1 800 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 COG1Q8WTW3 980 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 DLG3Q92796 817 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 SCYL1Q96KG9 808 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 POLR3GLQ9BT43 218 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 KNSTRNQ9Y448 316 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
SEM1-220ENST00000619259 DLC1Q96QB1 1528 aa5.64□□□□□ -1.51
SEM1-220ENST00000619259 ARHGEF28Q8N1W1 1705 aaKnown RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 MYOCOSA0A1B0GUC4 107 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 PEX10O60683 326 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 ULK1O75385 1050 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 LRG1P02750 347 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 CYP17A1P05093 508 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 MMEP08473 750 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 YBX3P16989 372 aaKnown RBP eCLIP5.63□□□□□ -1.51
SEM1-220ENST00000619259 PTX3P26022 381 aaPredicted RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 MC3RP41968 323 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms