RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 PPP1R21Q6ZMI0 780 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 TRAPPC11Q7Z392 1133 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 ARMC9Q7Z3E5 817 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 RIN2Q8WYP3 895 aaPredicted RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 RFFLQ8WZ73 363 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 RTFDC1Q9BY42 306 aaPredicted RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 SMARCAL1Q9NZC9 954 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 SLIT3O75094 1523 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 STAM2O75886 525 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 FIGNQ5HY92 759 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 METTL13Q8N6R0 699 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 LACRTQ9GZZ8 138 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 TCHHQ07283 1943 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 FAM208AQ9UK61 1670 aaKnown RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 RASGRF2O14827 1237 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 P4HBP07237 508 aaKnown RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 SOX5P35711 763 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 LMNB2Q03252 620 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 ZNF211Q13398 564 aaPredicted RBP15□□□□□ -0.01
CNOT3-210ENST00000618939 PHLDB2Q86SQ0 1253 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 FEM1BQ9UK73 627 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 BCS1LQ9Y276 419 aa15□□□□□ -0.01
CNOT3-210ENST00000618939 CCND2P30279 289 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 VAMP7P51809 220 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 PMS1P54277 932 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 SNX16P57768 344 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 RSRC2Q7L4I2 434 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 PALM2Q8IXS6 379 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 MRPL47Q9HD33 250 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 HERC5Q9UII4 1024 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 HPCAL4Q9UM19 191 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 WTIPA6NIX2 430 aaPredicted RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 PODXLO00592 558 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 STAMBPO95630 424 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 P4HA1P13674 534 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 SLC9A1P19634 815 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 IRX5P78411 483 aaPredicted RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 EPHA7Q15375 998 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 TUFT1Q9NNX1 390 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 RBM12Q9NTZ6 932 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 INTS13Q9NVM9 706 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 PITPNM2Q9BZ72 1349 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 SLC16A4O15374 487 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 SLC16A3O15427 465 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 SLC26A4O43511 780 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 QARSP47897 775 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 ZNF131P52739 623 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 NAA25Q14CX7 972 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 RNF207Q6ZRF8 634 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 RPUSD2Q8IZ73 545 aaKnown RBP14.99□□□□□ -0.01
CNOT3-210ENST00000618939 RMDN3Q96TC7 470 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 TBC1D22BQ9NU19 505 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 ANAPC5Q9UJX4 755 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 DUSP10Q9Y6W6 482 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 MYO3BQ8WXR4 1341 aa14.99□□□□□ -0.01
CNOT3-210ENST00000618939 ZNF233A6NK53 670 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 PHBP35232 272 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 CYP4F22Q6NT55 531 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 ZNF746Q6NUN9 644 aaPredicted RBP14.98□□□□□ -0.01
CNOT3-210ENST00000618939 MIS18BP1Q6P0N0 1132 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 SEMA6BQ9H3T3 888 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 SLITRK6Q9H5Y7 841 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 CSADQ9Y600 493 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 WDR64B1ANS9 1081 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 RPA1P27694 616 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 MAGEA9P43362 315 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 JAK3P52333 1124 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 SLC8A3P57103 927 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 LGSNQ5TDP6 509 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 STRIP1Q5VSL9 837 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 CTAGE3PQ8IX95 158 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 TTLL6Q8N841 843 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 ATRNO75882 1429 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 A0A1B0GUA9 196 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 ECM2O94769 699 aaPredicted RBP14.98□□□□□ -0.01
CNOT3-210ENST00000618939 SUN1O94901 812 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 FTLP02792 175 aaPredicted RBP14.98□□□□□ -0.01
CNOT3-210ENST00000618939 MYBP10242 640 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 KLRC1P26715 233 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 E2F4Q16254 413 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 RTKN2Q8IZC4 609 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 CNOT8Q9UFF9 292 aaKnown RBP14.98□□□□□ -0.01
CNOT3-210ENST00000618939 AMACRQ9UHK6 382 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 PSAPP07602 524 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 TRIP13Q15645 432 aaPredicted RBP14.98□□□□□ -0.01
CNOT3-210ENST00000618939 FAM160B1Q5W0V3 765 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 MMGT1Q8N4V1 131 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 L1RE1Q9UN81 338 aa14.98□□□□□ -0.01
CNOT3-210ENST00000618939 POC1B-GALNT4F8VUJ3 575 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 RNF8O76064 485 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 BAG6P46379 1132 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 HERVK_113P62684 666 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 TAB3Q8N5C8 712 aaPredicted RBP14.97□□□□□ -0.01
CNOT3-210ENST00000618939 RAVER2Q9HCJ3 691 aaKnown RBP14.97□□□□□ -0.01
CNOT3-210ENST00000618939 STK38LQ9Y2H1 464 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 CAMTA1Q9Y6Y1 1673 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 EMSYQ7Z589 1322 aa14.97□□□□□ -0.01
CNOT3-210ENST00000618939 FOXP2O15409 715 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms