RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 DRD4P21917 467 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 ALDH5A1P51649 535 aaPredicted RBP10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 IFI35P80217 286 aaPredicted RBP10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 BYSLQ13895 437 aaKnown RBP10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLC30A9Q6PML9 568 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 KIAA0895Q8NCT3 520 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 CCT6BQ92526 530 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 CUEDC2Q9H467 287 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 THRAP3Q9Y2W1 955 aaKnown RBP10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 MYMKA6NI61 221 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 SYCE1Q8N0S2 351 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 MREGQ8N565 214 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 WDR66Q8TBY9 1149 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 FAM129AQ9BZQ8 928 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 GGA2Q9UJY4 613 aa10.36□□□□□ -0.75
TMPRSS4-220ENST00000618855 A8MUI8 341 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 DDX39AO00148 427 aaKnown RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 GFPT2O94808 682 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 TNFRSF8P28908 595 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 RCAN1P53805 252 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 RAD23BP54727 409 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 PTK2Q05397 1052 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 GRAPQ13588 217 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 UAP1Q16222 522 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 TLDC1Q6P9B6 456 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 ERICH1Q86X53 443 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 INPP4AQ96PE3 977 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLC12A6Q9UHW9 1150 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 FZD1Q9UP38 647 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 SIK3Q9Y2K2 1263 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 F8VZ95 297 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 DNAJC8O75937 253 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 SHBGP04278 402 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 NR2F2P24468 414 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 CTCFP49711 727 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 ZNF131P52739 623 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 LRRC63Q05C16 580 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 TTLL12Q14166 644 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 ARHGAP44Q17R89 818 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 EXOC3L4Q17RC7 722 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 KRT25Q7Z3Z0 450 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 CCDC65Q8IXS2 484 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 REXO1Q8N1G1 1221 aaKnown RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 GLIS3Q8NEA6 775 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 LRRC27Q9C0I9 530 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 CTTNBP2NLQ9P2B4 639 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 ARMCX3Q9UH62 379 aaPredicted RBP10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 ASIC3Q9UHC3 531 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 LAMA4Q16363 1823 aa10.35□□□□□ -0.75
TMPRSS4-220ENST00000618855 NWD1Q149M9 1564 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 MGRN1O60291 552 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 HLA-DOAP06340 250 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 GYS1P13807 737 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 ADCY2Q08462 1091 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 PSMD2Q13200 908 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLMAPQ14BN4 828 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 SLC30A10Q6XR72 485 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 UNC13DQ70J99 1090 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 TMC3Q7Z5M5 1100 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 COL23A1Q86Y22 540 aaPredicted RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 NSUN4Q96CB9 384 aaKnown RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 AK8Q96MA6 479 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 NAP1L3Q99457 506 aaPredicted RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 TRIM4Q9C037 500 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 STK32BQ9NY57 414 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 POLLQ9UGP5 575 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 LTN1O94822 1766 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 MYH13Q9UKX3 1938 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 CCND1P24385 295 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 USP11P51784 963 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 CLEC4GQ6UXB4 293 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 C3orf20Q8ND61 904 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 EPS8L3Q8TE67 593 aaKnown RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 ZNF408Q9H9D4 720 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 MAGEF1Q9HAY2 307 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 TMOD4Q9NZQ9 345 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 TRIM33Q9UPN9 1127 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 USP15Q9Y4E8 981 aaPredicted RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 XRCC5P13010 732 aaKnown RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 TNFAIP3P21580 790 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 SHROOM1Q2M3G4 852 aaPredicted RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 GUF1Q8N442 669 aaKnown RBP10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 FBXO25Q8TCJ0 367 aa10.34□□□□□ -0.75
TMPRSS4-220ENST00000618855 GHRP10912 638 aa10.33□□□□□ -0.76
TMPRSS4-220ENST00000618855 PLCG2P16885 1265 aa10.33□□□□□ -0.76
TMPRSS4-220ENST00000618855 SLC9A1P19634 815 aa10.33□□□□□ -0.76
TMPRSS4-220ENST00000618855 STAT1P42224 750 aa10.33□□□□□ -0.76
TMPRSS4-220ENST00000618855 MSH2P43246 934 aa10.33□□□□□ -0.76
TMPRSS4-220ENST00000618855 ERFP50548 548 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms