RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 KCTD19Q17RG1 926 aaPredicted RBP22.12■■□□□ 1.13
PCSK6-217ENST00000618548 KNOP1Q1ED39 458 aaKnown RBP22.12■■□□□ 1.13
PCSK6-217ENST00000618548 DPH6Q7L8W6 267 aa22.12■■□□□ 1.13
PCSK6-217ENST00000618548 CALR3Q96L12 384 aaKnown RBP22.12■■□□□ 1.13
PCSK6-217ENST00000618548 NUDCD1Q96RS6 583 aa22.12■■□□□ 1.13
PCSK6-217ENST00000618548 L3MBTL1Q9Y468 752 aa22.12■■□□□ 1.13
PCSK6-217ENST00000618548 AGPSO00116 658 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 ZC3H18Q86VM9 953 aaKnown RBP22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USH1CQ9Y6N9 552 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 MIF4GDA9UHW6 222 aaKnown RBP22.11■■□□□ 1.13
PCSK6-217ENST00000618548 CHRNA3P32297 505 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 ERVK-9P63128 1117 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 HOOK2Q96ED9 719 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 GGA1Q9UJY5 639 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L15C9J2P7 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L13C9JLJ4 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L11C9JVI0 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L18D6R9N7 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L22D6RA61 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L17D6RBQ6 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L19D6RCP7 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L20D6RJB6 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 WNT7AO00755 349 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 RWDD2BP57060 319 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L24Q0WX57 530 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 RCN2Q14257 317 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 USP17L6PQ6QN14 398 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 ZNF507Q8TCN5 953 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 LARSQ9P2J5 1176 aaKnown RBP22.11■■□□□ 1.13
PCSK6-217ENST00000618548 LOC102724428A0A0B4J2F2 783 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 SIK1P57059 783 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 GTF2IP78347 998 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 SLC35G2Q8TBE7 412 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 MINPP1Q9UNW1 487 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 LEMD3Q9Y2U8 911 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 THRAP3Q9Y2W1 955 aaKnown RBP22.11■■□□□ 1.13
PCSK6-217ENST00000618548 ARL2BPQ9Y2Y0 163 aa22.11■■□□□ 1.13
PCSK6-217ENST00000618548 TOM1O60784 492 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 CPP00450 1065 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 DLATP10515 647 aaKnown RBP22.1■■□□□ 1.13
PCSK6-217ENST00000618548 NAALADL2Q58DX5 795 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 BBOF1Q8ND07 529 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 HSPA9P38646 679 aaKnown RBP22.1■■□□□ 1.13
PCSK6-217ENST00000618548 CENPPQ6IPU0 288 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 CCDC89Q8N998 374 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 PIGOQ8TEQ8 1089 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 STAMBPL1Q96FJ0 436 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 ERP44Q9BS26 406 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 HOXA7P31268 230 aaPredicted RBP22.1■■□□□ 1.13
PCSK6-217ENST00000618548 STAT3P40763 770 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 CFAP157Q5JU67 520 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 FAM84BQ96KN1 310 aaPredicted RBP22.1■■□□□ 1.13
PCSK6-217ENST00000618548 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
PCSK6-217ENST00000618548 TCRBV5S4A2TA0A5A2 114 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 SMIM22K7EJ46 135 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 FTLP02792 175 aaPredicted RBP22.09■■□□□ 1.13
PCSK6-217ENST00000618548 EPM2AIP1Q7L775 607 aaPredicted RBP22.09■■□□□ 1.13
PCSK6-217ENST00000618548 CEP95Q96GE4 821 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 HEMGNQ9BXL5 484 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 VCX3BQ9H321 246 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 ITGA4P13612 1032 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 DHX34Q14147 1143 aaKnown RBP22.09■■□□□ 1.13
PCSK6-217ENST00000618548 ZYXQ15942 572 aaKnown RBP22.09■■□□□ 1.13
PCSK6-217ENST00000618548 JAMLQ86YT9 394 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 SH3GL3Q99963 347 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 NAGPAQ9UK23 515 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 FBXO41Q8TF61 875 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 CCND1P24385 295 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 UBXN2AP68543 259 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 SATB1Q01826 763 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 ZNF844Q08AG5 666 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 HP1BP3Q5SSJ5 553 aaPredicted RBP22.09■■□□□ 1.13
PCSK6-217ENST00000618548 MEI1Q5TIA1 1274 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 CNBD1Q8NA66 436 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.09■■□□□ 1.13
PCSK6-217ENST00000618548 C1orf54Q8WWF1 131 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 USP40Q9NVE5 1235 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 BSDC1Q9NW68 430 aaPredicted RBP22.09■■□□□ 1.13
PCSK6-217ENST00000618548 DCTN4Q9UJW0 460 aa22.09■■□□□ 1.13
PCSK6-217ENST00000618548 RIMS1Q86UR5 1692 aaKnown RBP22.08■■□□□ 1.13
PCSK6-217ENST00000618548 STXBP3O00186 592 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 STAMBPO95630 424 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.13
PCSK6-217ENST00000618548 BCS1LQ9Y276 419 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 IFT172Q9UG01 1749 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 A0A0G2JND7 137 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 TRIM49P0CI25 452 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 TRIM49CP0CI26 452 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 KCNJ1P48048 391 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 IRF2BP1Q8IU81 584 aa22.08■■□□□ 1.13
PCSK6-217ENST00000618548 CELF1Q92879 486 aaKnown RBP22.08■■□□□ 1.13
PCSK6-217ENST00000618548 NSUN4Q96CB9 384 aaKnown RBP22.08■■□□□ 1.13
PCSK6-217ENST00000618548 EPHB6O15197 1021 aa22.08■■□□□ 1.12
PCSK6-217ENST00000618548 VEGFAP15692 232 aaPredicted RBP22.08■■□□□ 1.12
PCSK6-217ENST00000618548 GPATCH4Q5T3I0 446 aaKnown RBP22.08■■□□□ 1.12
PCSK6-217ENST00000618548 C3orf20Q8ND61 904 aa22.08■■□□□ 1.12
PCSK6-217ENST00000618548 ADAM33Q9BZ11 813 aa22.08■■□□□ 1.12
PCSK6-217ENST00000618548 GDF3Q9NR23 364 aa22.08■■□□□ 1.12
PCSK6-217ENST00000618548 TMEM120BA0PK00 339 aa22.07■■□□□ 1.12
PCSK6-217ENST00000618548 CYP19A1P11511 503 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms