RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 NUMA1Q14980 2115 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 ZNF18P17022 549 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 WLSQ5T9L3 541 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 B3GALT6Q96L58 329 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 SPRTNQ9H040 489 aaPredicted RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 DSEQ9UL01 958 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 DYNC1LI1Q9Y6G9 523 aaKnown RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 MSH6P52701 1360 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 B4E1Z4 1266 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 PSMC3P17980 439 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 MTTPP55157 894 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 ARHGAP17Q68EM7 881 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 VTI1AQ96AJ9 217 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 SLC10A4Q96EP9 437 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 EIF2S1P05198 315 aaKnown RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 OR8H2Q8N162 312 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 MTMR6Q9Y217 621 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 IMPDH2P12268 514 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 DARS2Q6PI48 645 aaKnown RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 TOGARAM2Q6ZUX3 1019 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 OSCARQ8IYS5 282 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 OTUB1Q96FW1 271 aaPredicted RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 SAYSD1Q9NPB0 183 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 NFKBIL1Q9UBC1 381 aaPredicted RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
COL5A1-208ENST00000618395 GAS7O60861 476 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 ZCCHC18P0CG32 403 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 PTK2Q05397 1052 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 PPM1KQ8N3J5 372 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 CEP44Q9C0F1 390 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 STK17AQ9UEE5 414 aa16■□□□□ 0.15
COL5A1-208ENST00000618395 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 ITSN2Q9NZM3 1697 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 SERPINH1P50454 418 aaKnown RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 ZNF827Q17R98 1081 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 C4orf50Q6ZRC1 276 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 RUBCNLQ9H714 662 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 MRPL47Q9HD33 250 aaKnown RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 KLHL18O94889 574 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 S100A6P06703 90 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 MRPL1Q9BYD6 325 aaKnown RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 GTSE1Q9NYZ3 720 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 TTC21BQ7Z4L5 1316 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 SEMA3DO95025 777 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 TJP3O95049 919 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 TAS2R42Q7RTR8 314 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 FAM178BQ8IXR5 827 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 NPHS2Q9NP85 383 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 TRIM17Q9Y577 477 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 PDZK1P1A8MUH7 402 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 SNAP25P60880 206 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 ZBED6P86452 979 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 PUM3Q15397 648 aaKnown RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 FGD2Q7Z6J4 655 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 RDH13Q8NBN7 331 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 GINM1Q9NU53 330 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 SKAP2O75563 359 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 FAM180AQ6UWF9 173 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 CCDC28BQ9BUN5 200 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 KCTD6Q8NC69 237 aa15.99■□□□□ 0.15
COL5A1-208ENST00000618395 ZFRQ96KR1 1074 aaKnown RBP15.99■□□□□ 0.15
COL5A1-208ENST00000618395 IGBP1P78318 339 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 RSPH1Q8WYR4 309 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 SMARCA1P28370 1054 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 ARL4CP56559 192 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 FAM45BPQ6NSW5 357 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 MAEAQ7L5Y9 396 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 FHDC1Q9C0D6 1143 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 DCLRE1BQ9H816 532 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 F8VZ95 297 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 TCF3P15923 654 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 C21orf59P57076 290 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 ADAM9Q13443 819 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 IYDQ6PHW0 289 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 TRAPPC9Q96Q05 1148 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 SMARCAD1Q9H4L7 1026 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 COPB2P35606 906 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 ALDH18A1P54886 795 aaKnown RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 BYSLQ13895 437 aaKnown RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 TSC22D1Q15714 1073 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 CAPSLQ8WWF8 208 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 FAM81BQ96LP2 452 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 TRIP13Q15645 432 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 MAPRE1Q15691 268 aaKnown RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 SARM1Q6SZW1 724 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 PAMP19021 973 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 LAMC2Q13753 1193 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 WAPLQ7Z5K2 1190 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 GPBP1Q86WP2 473 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 CEP95Q96GE4 821 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 CARD8Q9Y2G2 431 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 PMLP29590 882 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms