RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 CEP55Q53EZ4 464 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 FBXO46Q6PJ61 603 aaPredicted RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 GBP6Q6ZN66 633 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.523e-6■■■■□ 23.5
POLR2A-209ENST00000617998 KIAA1586Q9HCI6 787 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 CD4P01730 458 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 S100BP04271 92 aaPredicted RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 CA4P22748 312 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
POLR2A-209ENST00000617998 KIF5AQ12840 1032 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 ATAT1Q5SQI0 421 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 TAF2Q6P1X5 1199 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 PRR23CQ6ZRP0 262 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 FBXO28Q9NVF7 368 aa11.83□□□□□ -0.52
POLR2A-209ENST00000617998 A0A1B0GVL5 298 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
POLR2A-209ENST00000617998 LONP1P36776 959 aaKnown RBP11.82□□□□□ -0.52
POLR2A-209ENST00000617998 ANO4Q32M45 955 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 RINT1Q6NUQ1 792 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 UBL4BQ8N7F7 174 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 MRPL17Q9NRX2 175 aaKnown RBP11.82□□□□□ -0.52
POLR2A-209ENST00000617998 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 TM4SF1P30408 202 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 CASQ1P31415 396 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 CCNYQ8ND76 341 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 PSMC2P35998 433 aaKnown RBP11.82□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF165P49910 485 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 ITIH3Q06033 890 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 GOLGA8SH3BPF8 625 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 ICAM1P05362 532 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 PTPRAP18433 802 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 STAT1P42224 750 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 DNM1Q05193 864 aaKnown RBP11.82□□□□□ -0.52
POLR2A-209ENST00000617998 FKBP1CQ5VVH2 108 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 EFHBQ8N7U6 833 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
POLR2A-209ENST00000617998 TDRD10Q5VZ19 366 aaKnown RBP11.82□□□□□ -0.52
POLR2A-209ENST00000617998 APOA5Q6Q788 366 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 RAB20Q9NX57 234 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 LRRIQ1Q96JM4 1722 aa11.82□□□□□ -0.52
POLR2A-209ENST00000617998 SLIT1O75093 1534 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 BTBD19C9JJ37 291 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF286BP0CG31 522 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 KRT83P78385 493 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 KIAA1755Q5JYT7 1200 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 LMBRD2Q68DH5 695 aaPredicted RBP11.81□□□□□ -0.52
POLR2A-209ENST00000617998 AK8Q96MA6 479 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 CYP4F11Q9HBI6 524 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 PRKCQQ04759 706 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 LRRC71Q8N4P6 559 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 RIPOR3Q96MK2 946 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 RNF186Q9NXI6 227 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 PCDHB6Q9Y5E3 794 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 CKBP12277 381 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 ADORA2BP29275 332 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 TMX1Q9H3N1 280 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 KCNQ5Q9NR82 932 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 BTBD18B2RXH4 712 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 H3BRB1 525 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 HMBSP08397 361 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 KLRK1P26718 216 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 PCSK1P29120 753 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 RFC5P40937 340 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 FKBP1AP62942 108 aaKnown RBP11.81□□□□□ -0.52
POLR2A-209ENST00000617998 TMEM132DQ14C87 1099 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 TAAR1Q96RJ0 339 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 TUT1Q9H6E5 874 aaKnown RBP11.81□□□□□ -0.52
POLR2A-209ENST00000617998 FAM170AA1A519 330 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 SLC16A4O15374 487 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
POLR2A-209ENST00000617998 NPTXRO95502 500 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 PLA2G4BP0C869 781 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
POLR2A-209ENST00000617998 CRHR2Q13324 411 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 CTXN3Q4LDR2 81 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 SLC45A4Q5BKX6 768 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 SMAP1Q8IYB5 467 aaPredicted RBP11.81□□□□□ -0.52
POLR2A-209ENST00000617998 LXNQ9BS40 222 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 MEGF6O75095 1541 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 RGS12O14924 1447 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 ABCB4P21439 1286 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 RAB27AP51159 221 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 C6orf163Q5TEZ5 329 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 CFAP57Q96MR6 1250 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 KIAA1683Q9H0B3 1180 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 NCDNQ9UBB6 729 aa11.81□□□□□ -0.52
POLR2A-209ENST00000617998 C16orf86Q6ZW13 317 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 NCKAP1Q9Y2A7 1128 aa11.8□□□□□ -0.52
POLR2A-209ENST00000617998 B3GAT3O94766 335 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms