RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 GIPC3Q8TF64 312 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 CNOT6LQ96LI5 555 aaKnown RBP7.94□□□□□ -1.14
PDE6A-205ENST00000617647 GDAQ9Y2T3 454 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 MAP3K2Q9Y2U5 619 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 TMEM98Q9Y2Y6 226 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 ASB3Q9Y575 518 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 FRMPD1Q5SYB0 1578 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 A0A0G2JND7 137 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 UNC5CO95185 931 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 ASLP04424 464 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 BMP6P22004 513 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 PGM1P36871 562 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 IRX4P78413 519 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 ATP1A4Q13733 1029 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 MAP3K21Q5TCX8 1036 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 C1orf228Q6PIY5 440 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 CYP4X1Q8N118 509 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 SMYD1Q8NB12 490 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 FAM13CQ8NE31 585 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 SUPT20HQ8NEM7 779 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 LINS1Q8NG48 757 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 DQX1Q8TE96 717 aaKnown RBP7.94□□□□□ -1.14
PDE6A-205ENST00000617647 SLC12A6Q9UHW9 1150 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 REXO2Q9Y3B8 237 aaKnown RBP7.94□□□□□ -1.14
PDE6A-205ENST00000617647 SLC4A4Q9Y6R1 1079 aa7.94□□□□□ -1.14
PDE6A-205ENST00000617647 F8W031 263 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 KRT36O76013 467 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 BMP15O95972 392 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 RPN1P04843 607 aaKnown RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 OCM2P0CE71 109 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 OCMP0CE72 109 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 FGFR4P22455 802 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 IFI35P80217 286 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 HPCAP84074 193 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 DR1Q01658 176 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 BNIP1Q12981 228 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CCDC153Q494R4 210 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CCDC84Q86UT8 332 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 GRAMD1AQ96CP6 724 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 TRIM51Q9BSJ1 452 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 TIPINQ9BVW5 301 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 DBF4Q9UBU7 674 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PARP2Q9UGN5 583 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ASIC3Q9UHC3 531 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 TRIM17Q9Y577 477 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 RANBP6O60518 1105 aaKnown RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PLEKP08567 350 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 KRT10P13645 584 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 FDPSP14324 419 aaKnown RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PRLRP16471 622 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 MCM7P33993 719 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ERVK-9P63128 1117 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 VWA3BQ502W6 1294 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 C14orf80Q86SX3 495 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ERMNQ8TAM6 284 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 THAP11Q96EK4 314 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PBKQ96KB5 322 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 RUNDC3BQ96NL0 473 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 TBC1D10AQ9BXI6 508 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 FHDC1Q9C0D6 1143 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 OLFML3Q9NRN5 406 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ARPP21Q9UBL0 812 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 RCCD1A6NED2 376 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CCDC188H7C350 402 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 MAGEB3O15480 346 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 THAP12O43422 761 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CCDC22O60826 627 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CBX6O95503 412 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CLPTM1O96005 669 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 TNFRSF8P28908 595 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PPP1R2P41236 205 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 SLC1A4P43007 532 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PDE4DQ08499 809 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PABPC4Q13310 644 aaKnown RBP eCLIP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 SLC29A2Q14542 456 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ASIC2Q16515 512 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 RTN1Q16799 776 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PPP1R2P3Q6NXS1 205 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 RBM44Q6ZP01 1051 aaKnown RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 FAM186BQ8IYM0 893 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ERLEC1Q96DZ1 483 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CELF4Q9BZC1 486 aaKnown RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ANKRD2Q9GZV1 360 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ASCC2Q9H1I8 757 aaPredicted RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 MYLK2Q9H1R3 596 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 ARHGEF3Q9NR81 526 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PAG1Q9NWQ8 432 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 SAP30BPQ9UHR5 308 aaKnown RBP7.93□□□□□ -1.14
PDE6A-205ENST00000617647 CCPG1Q9ULG6 757 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 HPSEQ9Y251 543 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 PCDHB6Q9Y5E3 794 aa7.93□□□□□ -1.14
PDE6A-205ENST00000617647 NEO1Q92859 1461 aa7.92□□□□□ -1.14
PDE6A-205ENST00000617647 HTR3EA5X5Y0 456 aa7.92□□□□□ -1.14
PDE6A-205ENST00000617647 TTLL13PA6NNM8 815 aa7.92□□□□□ -1.14
PDE6A-205ENST00000617647 GNAT3A8MTJ3 354 aa7.92□□□□□ -1.14
PDE6A-205ENST00000617647 STRNO43815 780 aa7.92□□□□□ -1.14
PDE6A-205ENST00000617647 CD44P16070 742 aaKnown RBP7.92□□□□□ -1.14
PDE6A-205ENST00000617647 MX2P20592 715 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms