RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 FOXR2Q6PJQ5 311 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 FAM53CQ9NYF3 392 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 RNF181Q9P0P0 153 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 AKR1B10O60218 316 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 RAPGEF1Q13905 1077 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 VGLL4Q14135 290 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 ZNF720Q7Z2F6 126 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 NR3C2P08235 984 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 KIF11P52732 1056 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 KRT83P78385 493 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 GFPT1Q06210 699 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 MAPK7Q13164 816 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 TREML2Q5T2D2 321 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 MOB2Q70IA6 237 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 ANKRD13CQ8N6S4 541 aa17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 CCDC43Q96MW1 224 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 NAPGQ99747 312 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-212ENST00000616701 EIF3CLB5ME19 914 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 QARSP47897 775 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 MARSP56192 900 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 EIF3CQ99613 913 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 AFG3L2Q9Y4W6 797 aa17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 K7ENM7 598 aa17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 BACH1O14867 736 aa17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 TLR2O60603 784 aa17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 XRCC5P13010 732 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 SPA17Q15506 151 aa17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.06■□□□□ 0.321e-12■□□□□ 9.5
SEMA3B-212ENST00000616701 HAUS4Q9H6D7 363 aa17.06■□□□□ 0.32
SEMA3B-212ENST00000616701 FAM170AA1A519 330 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 YWHABP31946 246 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 RARRES1P49788 294 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 GHRHRQ02643 423 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 GJB7Q6PEY0 223 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 CCDC170Q8IYT3 715 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 SYCP3Q8IZU3 236 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 FAM133AQ8N9E0 248 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 PCIF1Q9H4Z3 704 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 A1CFQ9NQ94 594 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 DONSONQ9NYP3 566 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 MYH11P35749 1972 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 AFPP02771 609 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 SOX10P56693 466 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 NIPA1Q7RTP0 329 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 FRMD5Q7Z6J6 570 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 MLXIPQ9HAP2 919 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 CEP72Q9P209 647 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 SNCAIPQ9Y6H5 919 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 PHIPQ8WWQ0 1821 aa17.05■□□□□ 0.32
SEMA3B-212ENST00000616701 SRGAP2O75044 1071 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 RPL13P26373 211 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 FSTL1Q12841 308 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 BIRC2Q13490 618 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 PPP2R5AQ15172 486 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 SFMBT2Q5VUG0 894 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 IFIH1Q9BYX4 1025 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 TBC1D22BQ9NU19 505 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 FAM184BQ9ULE4 1060 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 PCDHA13Q9Y5I0 950 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 RLFQ13129 1914 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 POLR3GO15318 223 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 ATP1A1P05023 1023 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 CCND2P30279 289 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 HNRNPH3P31942 346 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 ZNF131P52739 623 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 VSIG10LQ86VR7 867 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 FAM186BQ8IYM0 893 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 C12orf42Q96LP6 360 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 CDC23Q9UJX2 597 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 PARP14Q460N5 1801 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 KRT86O43790 486 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 RGS20O76081 388 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 TRIM49P0CI25 452 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 TRIM49CP0CI26 452 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 PNMA6AP0CW24 399 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 XKR9Q5GH70 373 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 HGSNATQ68CP4 663 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 DNAAF5Q86Y56 855 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 SPON1Q9HCB6 807 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 CYP39A1Q9NYL5 469 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 ODF2LQ9ULJ1 636 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 FHOD1Q9Y613 1164 aa17.04■□□□□ 0.32
SEMA3B-212ENST00000616701 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
SEMA3B-212ENST00000616701 NLRX1Q86UT6 975 aa17.03■□□□□ 0.32
SEMA3B-212ENST00000616701 SLC35C1Q96A29 364 aa17.03■□□□□ 0.32
SEMA3B-212ENST00000616701 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.03■□□□□ 0.32
SEMA3B-212ENST00000616701 KIFC3Q9BVG8 833 aa17.03■□□□□ 0.32
SEMA3B-212ENST00000616701 GANQ9H2C0 597 aa17.03■□□□□ 0.32
SEMA3B-212ENST00000616701 ELP3Q9H9T3 547 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms