RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 C12orf76Q8N812 135 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC3-209ENST00000616395 PIBF1Q8WXW3 757 aa20.03■□□□□ 0.8
TRAPPC3-209ENST00000616395 CDHR5Q9HBB8 845 aa20.03■□□□□ 0.8
TRAPPC3-209ENST00000616395 LOXHD1Q8IVV2 1947 aa20.03■□□□□ 0.8
TRAPPC3-209ENST00000616395 E7EWF7 191 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 COL9A3Q14050 684 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 PUM1Q14671 1186 aaKnown RBP eCLIP20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 PLCB4Q15147 1175 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 RARS2Q5T160 578 aaKnown RBP20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 KANK3Q6NY19 840 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 KCNT2Q6UVM3 1135 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 LRRC55Q6ZSA7 311 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 PLCD3Q8N3E9 789 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 NME8Q8N427 588 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 MRPL43Q8N983 215 aaKnown RBP20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 CDHR1Q96JP9 859 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 CNTNAP3BQ96NU0 1288 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 KIF2CQ99661 725 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 CNTNAP3Q9BZ76 1288 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 CNNM2Q9H8M5 875 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 ATP6V0A4Q9HBG4 840 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 DBR1Q9UK59 544 aaKnown RBP20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 FRYLO94915 3013 aa20.02■□□□□ 0.8
TRAPPC3-209ENST00000616395 SMIM35A0A1B0GVV1 85 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 MEIS2O14770 477 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 CLASP2O75122 1294 aaKnown RBP20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 RPS6KA5O75582 802 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 NEK4P51957 841 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 KRT17Q04695 432 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 SMC1AQ14683 1233 aaKnown RBP20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 TMEM40Q8WWA1 233 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 CUL5Q93034 780 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 TM6SF1Q9BZW5 370 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 SEMA4AQ9H3S1 761 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 TMEM161AQ9NX61 479 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 ST3GAL5Q9UNP4 418 aa20.02■□□□□ 0.79
TRAPPC3-209ENST00000616395 C2orf71A6NGG8 1288 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 MTMR1Q13613 665 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 KIAA1841Q6NSI8 718 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 MTHFD1LQ6UB35 978 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 ZNF558Q96NG5 402 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 RTP3Q9BQQ7 232 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 AZI2Q9H6S1 392 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 SENP2Q9HC62 589 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 CYP26B1Q9NR63 512 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 USTQ9Y2C2 406 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 R4GN57 208 aa20.01■□□□□ 0.79
TRAPPC3-209ENST00000616395 PIK3CDO00329 1044 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 EOMESO95936 686 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 PPM1AP35813 382 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 FAM189BP81408 668 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 NECTIN1Q15223 517 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 ATAT1Q5SQI0 421 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 FAM43BQ6ZT52 329 aaPredicted RBP20■□□□□ 0.79
TRAPPC3-209ENST00000616395 RALYLQ86SE5 291 aaKnown RBP20■□□□□ 0.79
TRAPPC3-209ENST00000616395 SIX5Q8N196 739 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
TRAPPC3-209ENST00000616395 CASD1Q96PB1 797 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 TMEM117Q9H0C3 514 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 SPG21Q9NZD8 308 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 SNX14Q9Y5W7 946 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 CYP46A1Q9Y6A2 500 aa20■□□□□ 0.79
TRAPPC3-209ENST00000616395 KMT2BQ9UMN6 2715 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 NCOR2Q9Y618 2525 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 EP300Q09472 2414 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 CACNA1BQ00975 2339 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 SLC27A2O14975 620 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 HMGB1P09429 215 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 ANTXR2P58335 489 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 TRDNQ13061 729 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 TDGQ13569 410 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 CREB3L3Q68CJ9 461 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 CYP2W1Q8TAV3 490 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 FEZF2Q8TBJ5 459 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 ELAC1Q9H777 363 aaKnown RBP19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 JPH1Q9HDC5 661 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 RNF19AQ9NV58 838 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 FBXL21Q9UKT6 434 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 UBIAD1Q9Y5Z9 338 aa19.99■□□□□ 0.79
TRAPPC3-209ENST00000616395 GPR182O15218 404 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 KLRC1P26715 233 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 CA8P35219 290 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 ANKRD1Q15327 319 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 ODR4Q5SWX8 454 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 MB21D2Q8IYB1 491 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 KIAA0319LQ8IZA0 1049 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 KCNB2Q92953 911 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 HINFPQ9BQA5 517 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 DLL3Q9NYJ7 618 aa19.98■□□□□ 0.79
TRAPPC3-209ENST00000616395 BAZ2BQ9UIF8 2168 aaKnown RBP19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 PLPPR4Q7Z2D5 763 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 LRRC43Q8N309 656 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 NCOA7Q8NI08 942 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 PPP1R16BQ96T49 567 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 JADE2Q9NQC1 790 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 DZANK1Q9NVP4 752 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 SLC9A2Q9UBY0 812 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 DUSP12Q9UNI6 340 aa19.97■□□□□ 0.79
TRAPPC3-209ENST00000616395 EPG5Q9HCE0 2579 aa19.96■□□□□ 0.79
TRAPPC3-209ENST00000616395 IFIT3O14879 490 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 286.6 ms