RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 IFNAR2P48551 515 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 HERVK_113P62684 666 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 AMPD2Q01433 879 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 MYL7Q01449 175 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 PNMA8AQ86V59 439 aaPredicted RBP6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 ANKRD35Q8N283 1001 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 CERKQ8TCT0 537 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 KCNK9Q9NPC2 374 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 PLCB1Q9NQ66 1216 aa6.11□□□□□ -1.43
SYNCRIP-204ENST00000616122 CTNND1O60716 968 aaKnown RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 IRAK1P51617 712 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF211Q13398 564 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 RASA3Q14644 834 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 OTUD6AQ7L8S5 288 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 DDX42Q86XP3 938 aaKnown RBP eCLIP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 DEPTORQ8TB45 409 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 NEK9Q8TD19 979 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 STMN4Q9H169 189 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 USTQ9Y2C2 406 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 WDR64B1ANS9 1081 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 HGSO14964 777 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 KLHDC7AQ5VTJ3 777 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 RINT1Q6NUQ1 792 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SYT2Q8N9I0 419 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 EHD4Q9H223 541 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 TBC1D22BQ9NU19 505 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SERPINA10Q9UK55 444 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SIK3Q9Y2K2 1263 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 MYO3BQ8WXR4 1341 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 MAP2K7O14733 419 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 DAPK3O43293 454 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 CEP57Q86XR8 500 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 ACCSQ96QU6 501 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 IDI2Q9BXS1 227 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 FAM114A2Q9NRY5 505 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 NKIRAS1Q9NYS0 192 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SAMD15Q9P1V8 674 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 ANKRD26Q9UPS8 1709 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZSCAN5CA6NGD5 496 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 LIG4P49917 911 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 PRELPP51888 382 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 BPIFB4P59827 614 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 STRN3Q13033 797 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 NAB2Q15742 525 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLC51AQ86UW1 340 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 RUNDC3BQ96NL0 473 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 RIT2Q99578 217 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 PRDM4Q9UKN5 801 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SDK1Q7Z5N4 2213 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 A0A087WUV0 522 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 ANKRD62A6NC57 917 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 POLD1P28340 1107 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SREBF1P36956 1147 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 FMO5P49326 533 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SYN2Q92777 582 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 MS4A14Q96JA4 679 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 RNF146Q9NTX7 359 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 NOVA2Q9UNW9 492 aaKnown RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 SPATA31A6Q5VVP1 1343 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 FAM186AA6NE01 2351 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 A0A1W2PRG0 241 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 BUB1BO60566 1050 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 PPP1R37O75864 691 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 BAG6P46379 1132 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 TTC31Q49AM3 519 aaPredicted RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 ARHGEF16Q5VV41 709 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 DENND2CQ68D51 928 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 CIAPIN1Q6FI81 312 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 CREG2Q8IUH2 290 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 ANKS4BQ8N8V4 417 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 IPO4Q8TEX9 1081 aaKnown RBP6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 CARD9Q9H257 536 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 TRAF3IP3Q9Y228 551 aa6.1□□□□□ -1.43
SYNCRIP-204ENST00000616122 EMSYQ7Z589 1322 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 FAM86B1E9PN63 330 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 TRIM66O15016 1216 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 FANCGO15287 622 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLC16A4O15374 487 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 FTLP02792 175 aaPredicted RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 FAM86B2P0C5J1 330 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 MYBP10242 640 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 KRT76Q01546 638 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 ITIH3Q06033 890 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 IFT88Q13099 833 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 DMP1Q13316 513 aaPredicted RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 MTMR1Q13613 665 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 CUL1Q13616 776 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 GIT2Q14161 759 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 LIN9Q5TKA1 542 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 MCPH1Q8NEM0 835 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 CDHR1Q96JP9 859 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 CALR3Q96L12 384 aaKnown RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 RNPC3Q96LT9 517 aaKnown RBP6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 TMOD4Q9NZQ9 345 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 K7ERI5 159 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF263O14978 683 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 TLR2O60603 784 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 NR3C2P08235 984 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 DESP17661 470 aa6.09□□□□□ -1.43
SYNCRIP-204ENST00000616122 MFAP3P55082 362 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms