RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 AGO3Q9H9G7 860 aaKnown RBP28.35■■■□□ 2.13
SURF1-205ENST00000615505 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.35■■■□□ 2.13
SURF1-205ENST00000615505 FOXD4L1Q9NU39 408 aa28.35■■■□□ 2.13
SURF1-205ENST00000615505 IGKV6-21A0A0C4DH24 114 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 LYPLA2O95372 231 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 CD52P31358 61 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 CDC42EP1Q00587 391 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 PAK2Q13177 524 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 MKRN4PQ13434 485 aaPredicted RBP28.34■■■□□ 2.13
SURF1-205ENST00000615505 ODR4Q5SWX8 454 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.34■■■□□ 2.13
SURF1-205ENST00000615505 SLC7A3Q8WY07 619 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 PPP1R16BQ96T49 567 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 ZBED2Q9BTP6 218 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 RAB34Q9BZG1 259 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 SEMA6BQ9H3T3 888 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 SLC28A3Q9HAS3 691 aa28.34■■■□□ 2.13
SURF1-205ENST00000615505 GPR32O75388 356 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 SLC34A2O95436 690 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 FXR2P51116 673 aaKnown RBP eCLIP28.33■■■□□ 2.13
SURF1-205ENST00000615505 NLRP11P59045 1033 aaKnown RBP28.33■■■□□ 2.13
SURF1-205ENST00000615505 XKR9Q5GH70 373 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 FAM43BQ6ZT52 329 aaPredicted RBP28.33■■■□□ 2.13
SURF1-205ENST00000615505 MYOCDQ8IZQ8 938 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 FAM161BQ96MY7 647 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 FTHL17Q9BXU8 183 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 CDHR5Q9HBB8 845 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 TUFT1Q9NNX1 390 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 MTMR10Q9NXD2 777 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 PADI3Q9ULW8 664 aa28.33■■■□□ 2.13
SURF1-205ENST00000615505 YBX2Q9Y2T7 364 aaKnown RBP28.33■■■□□ 2.13
SURF1-205ENST00000615505 LAMA2P24043 3122 aaKnown RBP28.33■■■□□ 2.13
SURF1-205ENST00000615505 RBAK-RBAKDNI3L0D1 243 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 TLL1O43897 1013 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 RPS6KA5O75582 802 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 SYT1P21579 422 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 RFC5P40937 340 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 PRPHP41219 470 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 POLGP54098 1239 aaPredicted RBP28.32■■■□□ 2.12
SURF1-205ENST00000615505 PDIA5Q14554 519 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 OSMRQ99650 979 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 NKX2-4Q9H2Z4 354 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 TTYH1Q9H313 450 aaPredicted RBP28.32■■■□□ 2.12
SURF1-205ENST00000615505 ZNF576Q9H609 170 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 ANKEF1Q9NU02 776 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 SIP14410 1827 aa28.32■■■□□ 2.12
SURF1-205ENST00000615505 SZT2Q5T011 3432 aa28.31■■■□□ 2.12
SURF1-205ENST00000615505 ZBTB39O15060 712 aa28.31■■■□□ 2.12
SURF1-205ENST00000615505 HSP90AA1P07900 732 aaKnown RBP28.31■■■□□ 2.12
SURF1-205ENST00000615505 ZNF579Q8NAF0 562 aaKnown RBP28.31■■■□□ 2.12
SURF1-205ENST00000615505 CCDC43Q96MW1 224 aaKnown RBP28.31■■■□□ 2.12
SURF1-205ENST00000615505 SCLT1Q96NL6 688 aa28.31■■■□□ 2.12
SURF1-205ENST00000615505 POLR3CQ9BUI4 534 aaPredicted RBP28.31■■■□□ 2.12
SURF1-205ENST00000615505 LRWD1Q9UFC0 647 aa28.31■■■□□ 2.12
SURF1-205ENST00000615505 STK24Q9Y6E0 443 aa28.31■■■□□ 2.12
SURF1-205ENST00000615505 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.3■■■□□ 2.12
SURF1-205ENST00000615505 GPR182O15218 404 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 GJB5O95377 273 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 SPATA31C1P0DKV0 1188 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 XRCC6P12956 609 aaKnown RBP eCLIP28.3■■■□□ 2.12
SURF1-205ENST00000615505 MYOGP15173 224 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 NFX1Q12986 1120 aaKnown RBP28.3■■■□□ 2.12
SURF1-205ENST00000615505 HAUS3Q68CZ6 603 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 DTHD1Q6ZMT9 781 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 TMCO2Q7Z6W1 182 aaPredicted RBP28.3■■■□□ 2.12
SURF1-205ENST00000615505 FERMT3Q86UX7 667 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 CATSPER3Q86XQ3 398 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 TMEM40Q8WWA1 233 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 ADAMTS10Q9H324 1103 aa28.3■■■□□ 2.12
SURF1-205ENST00000615505 DHX33Q9H6R0 707 aaKnown RBP28.3■■■□□ 2.12
SURF1-205ENST00000615505 SUCLA2Q9P2R7 463 aaPredicted RBP28.3■■■□□ 2.12
SURF1-205ENST00000615505 NOC2LQ9Y3T9 749 aaKnown RBP28.3■■■□□ 2.12
SURF1-205ENST00000615505 GAS2O43903 313 aaKnown RBP28.29■■■□□ 2.12
SURF1-205ENST00000615505 RPA1P27694 616 aa28.29■■■□□ 2.12
SURF1-205ENST00000615505 GPC3P51654 580 aa28.29■■■□□ 2.12
SURF1-205ENST00000615505 DRP2Q13474 957 aa28.29■■■□□ 2.12
SURF1-205ENST00000615505 RAD9AQ99638 391 aa28.29■■■□□ 2.12
SURF1-205ENST00000615505 MICAL3Q7RTP6 2002 aa28.29■■■□□ 2.12
SURF1-205ENST00000615505 ENPP3O14638 875 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 MED24O75448 989 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 EIF4BP23588 611 aaKnown RBP28.28■■■□□ 2.12
SURF1-205ENST00000615505 ATP2C1P98194 919 aaPredicted RBP28.28■■■□□ 2.12
SURF1-205ENST00000615505 PPP2R2DQ66LE6 453 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 FAM117BQ6P1L5 589 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 IGSF22Q8N9C0 903 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 PIGOQ8TEQ8 1089 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 TCP11Q8WWU5 503 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 NLRP7Q8WX94 980 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 TOP1MTQ969P6 601 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 NACC1Q96RE7 527 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 ERVK-5Q9HDB9 667 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 ST3GAL5Q9UNP4 418 aa28.28■■■□□ 2.12
SURF1-205ENST00000615505 CA3P07451 260 aa28.27■■■□□ 2.12
SURF1-205ENST00000615505 MUTP22033 750 aa28.27■■■□□ 2.12
SURF1-205ENST00000615505 RHPN2Q8IUC4 686 aa28.27■■■□□ 2.12
SURF1-205ENST00000615505 UPP2O95045 317 aa28.26■■■□□ 2.11
SURF1-205ENST00000615505 BMP15O95972 392 aa28.26■■■□□ 2.11
SURF1-205ENST00000615505 CCT6AP40227 531 aaKnown RBP28.26■■■□□ 2.11
SURF1-205ENST00000615505 EMC2Q15006 297 aa28.26■■■□□ 2.11
SURF1-205ENST00000615505 ARL6IP4Q66PJ3 421 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms