RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 KIAA1328Q86T90 577 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 IL31RAQ8NI17 732 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 UNC45AQ9H3U1 944 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 EHMT1Q9H9B1 1298 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 FAM184BQ9ULE4 1060 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 EYA4O95677 639 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 PAX7P23759 505 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 RRAGAQ7L523 313 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 WRAP73Q9P2S5 460 aaPredicted RBP18.01■□□□□ 0.47
CNOT3-208ENST00000613073 ATAD5Q96QE3 1844 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 TBCAO75347 108 aaKnown RBP18■□□□□ 0.47
CNOT3-208ENST00000613073 NEBLO76041 1014 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 KRT14P02533 472 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 ITGB5P18084 799 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 NR2F2P24468 414 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 SEC24CP53992 1094 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 KCNA1Q09470 495 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 RINT1Q6NUQ1 792 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 SH3GL2Q99962 352 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 LRRC1Q9BTT6 524 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 ODF2LQ9ULJ1 636 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 TARSL2A2RTX5 802 aaKnown RBP18■□□□□ 0.47
CNOT3-208ENST00000613073 IPO5O00410 1097 aaKnown RBP18■□□□□ 0.47
CNOT3-208ENST00000613073 WDR46O15213 610 aaKnown RBP18■□□□□ 0.47
CNOT3-208ENST00000613073 GCNT3O95395 438 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 HOXD13P35453 343 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 KCNMA1Q12791 1236 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 SPP2Q13103 211 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 PPP2R5CQ13362 524 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 FIGNQ5HY92 759 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 CLEC4DQ8WXI8 215 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 WDR11Q9BZH6 1224 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 IKZF4Q9H2S9 585 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 STK24Q9Y6E0 443 aa18■□□□□ 0.47
CNOT3-208ENST00000613073 A0A1W2PQJ5 194 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 LRRC53A6NM62 1247 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 CHUKO15111 745 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 VCAM1P19320 739 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 RPS12P25398 132 aaKnown RBP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 SATB1Q01826 763 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 IFT88Q13099 833 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 B4GALNT4Q76KP1 1039 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 KRT26Q7Z3Y9 468 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 AENQ8WTP8 325 aaKnown RBP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 LACRTQ9GZZ8 138 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 KIAA1683Q9H0B3 1180 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 NLRC4Q9NPP4 1024 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 KLC4Q9NSK0 619 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 CTNND1O60716 968 aaKnown RBP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 HOXA7P31268 230 aaPredicted RBP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 CYLC1P35663 651 aaPredicted RBP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 CKAP4Q07065 602 aaKnown RBP17.99■□□□□ 0.47
CNOT3-208ENST00000613073 MIEF2Q96C03 454 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 CCDC42Q96M95 316 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 CEP63Q96MT8 703 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
CNOT3-208ENST00000613073 RCCD1A6NED2 376 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 HSD17B4P51659 736 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 KNOP1Q1ED39 458 aaKnown RBP17.98■□□□□ 0.47
CNOT3-208ENST00000613073 TRMT1LQ7Z2T5 733 aaKnown RBP17.98■□□□□ 0.47
CNOT3-208ENST00000613073 CACNA2D4Q7Z3S7 1137 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 LPAR1Q92633 364 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 PURBQ96QR8 312 aaKnown RBP17.98■□□□□ 0.47
CNOT3-208ENST00000613073 MXRA8Q9BRK3 442 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 TUFT1Q9NNX1 390 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 MCM8Q9UJA3 840 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 GOLGA8KD6RF30 607 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 CETN3O15182 167 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 FSBPO95073 299 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 E2F5Q15329 346 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 MYCT1Q8N699 235 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 WNK4Q96J92 1243 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 TEKT3Q9BXF9 490 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 HAUS4Q9H6D7 363 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 RPAP3Q9H6T3 665 aaPredicted RBP17.98■□□□□ 0.47
CNOT3-208ENST00000613073 ARHGAP20Q9P2F6 1191 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 PLAGL2Q9UPG8 496 aa17.98■□□□□ 0.47
CNOT3-208ENST00000613073 CLIC2O15247 247 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 NAA35Q5VZE5 725 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 FOXR2Q6PJQ5 311 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 TRIM59Q8IWR1 403 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 RNPC3Q96LT9 517 aaKnown RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 SLC38A10Q9HBR0 1119 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 KCNH7Q9NS40 1196 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 CTDP1Q9Y5B0 961 aaPredicted RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 ZNF541Q9H0D2 1346 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 ATP2C2O75185 946 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 FAM13AO94988 1023 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 NMT1P30419 496 aaKnown RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 CXCR5P32302 372 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 KRT83P78385 493 aa17.97■□□□□ 0.47
CNOT3-208ENST00000613073 ZC2HC1CQ53FD0 456 aaPredicted RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 PAPD7Q5XG87 772 aaKnown RBP17.97■□□□□ 0.47
CNOT3-208ENST00000613073 SCLT1Q96NL6 688 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms