RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ABI1Q8IZP0 508 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 LRRC43Q8N309 656 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 OSMRQ99650 979 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 ELAC1Q9H777 363 aaKnown RBP19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 HCFC2Q9Y5Z7 792 aa19.62■□□□□ 0.73
CSNK1E-215ENST00000612795 CCDC69A6NI79 296 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 DDX39AO00148 427 aaKnown RBP19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 RXRAP19793 462 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 PBX3P40426 434 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 ITIH3Q06033 890 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 SMC1AQ14683 1233 aaKnown RBP19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 KIZQ2M2Z5 673 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 FAM228AQ86W67 206 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 KIAA0319LQ8IZA0 1049 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 TDRD5Q8NAT2 981 aaKnown RBP19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 NKD2Q969F2 451 aaPredicted RBP19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 SMOC2Q9H3U7 446 aa19.61■□□□□ 0.73
CSNK1E-215ENST00000612795 ARP10275 920 aa19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 MTHFRP42898 656 aa19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 MCTP2Q6DN12 878 aa19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 ASTLQ6HA08 431 aaPredicted RBP19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 CYP2W1Q8TAV3 490 aa19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 ADAM7Q9H2U9 754 aa19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 AGO4Q9HCK5 861 aaKnown RBP19.6■□□□□ 0.73
CSNK1E-215ENST00000612795 IGHDP01880 384 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 ASGR2P07307 311 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 CALM1P0DP23 149 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 CALM2P0DP24 149 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 CALM3P0DP25 149 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 CRYBB1P53674 252 aaPredicted RBP19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 CEP55Q53EZ4 464 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 ZNF484Q5JVG2 852 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 PDXDC2PQ6P474 469 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 ERMP1Q7Z2K6 904 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 FRMD5Q7Z6J6 570 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 CCDC82Q8N4S0 544 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 ZNF302Q9NR11 478 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 SPG21Q9NZD8 308 aa19.59■□□□□ 0.73
CSNK1E-215ENST00000612795 PRC1O43663 620 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 ATG7O95352 703 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 VTNP04004 478 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 ID4P47928 161 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 BMS1Q14692 1282 aaKnown RBP19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 LRRC55Q6ZSA7 311 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 CCDC60Q8IWA6 550 aaPredicted RBP19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 CKAP2LQ8IYA6 745 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 METTL13Q8N6R0 699 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 RNF169Q8NCN4 708 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 PGBD1Q96JS3 809 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 CASD1Q96PB1 797 aa19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 DBR1Q9UK59 544 aaKnown RBP19.58■□□□□ 0.72
CSNK1E-215ENST00000612795 IGKV6D-21A0A0A0MT36 114 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 C2orf71A6NGG8 1288 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 CCNE2O96020 404 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 WEE2P0C1S8 567 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 GSPT1P15170 499 aaKnown RBP19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 ZSCAN20P17040 1043 aaPredicted RBP19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 FAM189BP81408 668 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 DSC3Q14574 896 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 RARS2Q5T160 578 aaKnown RBP19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 TTC22Q5TAA0 569 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 RAB11FIP4Q86YS3 637 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 TMTC2Q8N394 836 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 MRPL43Q8N983 215 aaKnown RBP19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 TMEM87AQ8NBN3 555 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 FLCNQ8NFG4 579 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 MTA3Q9BTC8 594 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 C2orf16Q68DN1 1984 aa19.57■□□□□ 0.72
CSNK1E-215ENST00000612795 SH2B2O14492 632 aaPredicted RBP19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 CLASP2O75122 1294 aaKnown RBP19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 C22orf31O95567 290 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 MCM5P33992 734 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 ZNF76P36508 570 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 CLCN5P51795 746 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 NAPAP54920 295 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 KIAA1841Q6NSI8 718 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 MIS18BP1Q6P0N0 1132 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 ABHD15Q6UXT9 468 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 ZDHHC14Q8IZN3 488 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 ADSSL1Q8N142 457 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 SLC39A11Q8N1S5 342 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 PLCD3Q8N3E9 789 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 TMEM87BQ96K49 555 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 ANO3Q9BYT9 981 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 RNF19AQ9NV58 838 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 DZANK1Q9NVP4 752 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 LIMD1Q9UGP4 676 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 VPS13AQ96RL7 3174 aa19.56■□□□□ 0.72
CSNK1E-215ENST00000612795 ZBTB42B2RXF5 422 aa19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 GPR32O75388 356 aa19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 FOSP01100 380 aaPredicted RBP19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 CHMLP26374 656 aa19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 TMTC3Q6ZXV5 915 aa19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 TRMT1LQ7Z2T5 733 aaKnown RBP19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 MAP7D2Q96T17 732 aa19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 RBM8AQ9Y5S9 174 aaKnown RBP19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 SLC12A7Q9Y666 1083 aa19.55■□□□□ 0.72
CSNK1E-215ENST00000612795 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.54■□□□□ 0.72
CSNK1E-215ENST00000612795 METAP2P50579 478 aaKnown RBP eCLIP19.54■□□□□ 0.729e-7■■■■■ 27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms