RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 SUGCTQ9HAC7 445 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 CYP26B1Q9NR63 512 aa20.24■□□□□ 0.83
SEMA3B-211ENST00000612509 IGKV6-21A0A0C4DH24 114 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 SLITRK3O94933 977 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 NPEPPSP55786 919 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 PAK2Q13177 524 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 KIZQ2M2Z5 673 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 RILPL1Q5EBL4 403 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 TPH2Q8IWU9 490 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 C4orf32Q8N8J7 132 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 TMEM40Q8WWA1 233 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 CEP170P1Q96L14 293 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 HSD17B14Q9BPX1 270 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 PPME1Q9Y570 386 aa20.23■□□□□ 0.83
SEMA3B-211ENST00000612509 VPS37CA5D8V6 355 aaPredicted RBP20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 TLL1O43897 1013 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 GPR32O75388 356 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 MAFO75444 373 aaPredicted RBP20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 LYPLA2O95372 231 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 GJB5O95377 273 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 CA3P07451 260 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 TECP42680 631 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 DRP2Q13474 957 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 TMEM266Q2M3C6 531 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 PPP2R2DQ66LE6 453 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 HSCBQ8IWL3 235 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 CDHR5Q9HBB8 845 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 PADI3Q9ULW8 664 aa20.22■□□□□ 0.83
SEMA3B-211ENST00000612509 PDCP20941 246 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 FXR2P51116 673 aaKnown RBP eCLIP20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 GPC3P51654 580 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 CRYBB1P53674 252 aaPredicted RBP20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 NLRP11P59045 1033 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 PTGDRQ13258 359 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 LINC01599Q8WXQ3 324 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 JPH2Q9BR39 696 aaPredicted RBP20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 SLC28A3Q9HAS3 691 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 ERVK-5Q9HDB9 667 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 NOC2LQ9Y3T9 749 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 COL4A6Q14031 1691 aa20.21■□□□□ 0.83
SEMA3B-211ENST00000612509 LAD1O00515 517 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 RPS6KA5O75582 802 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 RFC5P40937 340 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 POLGP54098 1239 aaPredicted RBP20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 XKR9Q5GH70 373 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 FAM117BQ6P1L5 589 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 OTUD6AQ7L8S5 288 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 ZNF710Q8N1W2 664 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 ERMNQ8TAM6 284 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 SLC7A3Q8WY07 619 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 ZBED2Q9BTP6 218 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 FTHL17Q9BXU8 183 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 ADAMTS10Q9H324 1103 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 DHX33Q9H6R0 707 aaKnown RBP20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 TUFT1Q9NNX1 390 aa20.2■□□□□ 0.82
SEMA3B-211ENST00000612509 CDH23Q9H251 3354 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 ZBTB39O15060 712 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 MED24O75448 989 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 ARHGEF15O94989 841 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 SPATA31C1P0DKV0 1188 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 DNM2P50570 870 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 GRIN2CQ14957 1233 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 EMC2Q15006 297 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 HAUS3Q68CZ6 603 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 BRAPQ7Z569 592 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 FAM228AQ86W67 206 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 ZNF668Q96K58 619 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 SCLT1Q96NL6 688 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 CDX2Q99626 313 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 POLR3CQ9BUI4 534 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 TMX1Q9H3N1 280 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 BMP2KQ9NSY1 1161 aaPredicted RBP20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 TTC3P53804 2025 aa20.19■□□□□ 0.82
SEMA3B-211ENST00000612509 LCHNA4D1U4 455 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 PRPHP41219 470 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 ATP2C1P98194 919 aaPredicted RBP20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 NFX1Q12986 1120 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 ODR4Q5SWX8 454 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 FERMT3Q86UX7 667 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 CATSPER3Q86XQ3 398 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 EXOC8Q8IYI6 725 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 NLRP7Q8WX94 980 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 TOP1MTQ969P6 601 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 CCDC43Q96MW1 224 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 RAD9AQ99638 391 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 TSPYL2Q9H2G4 693 aaPredicted RBP20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 ANKEF1Q9NU02 776 aa20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 SUCLA2Q9P2R7 463 aaPredicted RBP20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 COL4A4P53420 1690 aaPredicted RBP20.18■□□□□ 0.82
SEMA3B-211ENST00000612509 GAS2O43903 313 aaKnown RBP20.17■□□□□ 0.82
SEMA3B-211ENST00000612509 SYT1P21579 422 aa20.17■□□□□ 0.82
SEMA3B-211ENST00000612509 RPA1P27694 616 aa20.17■□□□□ 0.82
SEMA3B-211ENST00000612509 RARRES1P49788 294 aa20.17■□□□□ 0.82
SEMA3B-211ENST00000612509 HTRA4P83105 476 aaPredicted RBP20.17■□□□□ 0.82
SEMA3B-211ENST00000612509 TAP1Q03518 808 aa20.17■□□□□ 0.82
SEMA3B-211ENST00000612509 POTEGQ6S5H5 508 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms